Comp-neuro lab: add new packages, remove orphaned, clean up

- remove docs to reduce size
- remove R and Julia to reduce size
- remove orphaned nineml
- add pynn
- re-add paraview
- add neuron-devel (required to compile NEURON mod files)

Also update project URL.

Signed-off-by: Ankur Sinha (Ankur Sinha Gmail) <sanjay.ankur@gmail.com>
This commit is contained in:
Ankur Sinha (Ankur Sinha Gmail) 2021-02-15 15:44:18 +00:00 committed by kevin
parent 05916f616f
commit dd76b78f6d
3 changed files with 10 additions and 14 deletions

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@ -1,7 +1,7 @@
# Description: Packages for the NeuroFedora computational neuroscience lab image. # Description: Packages for the NeuroFedora computational neuroscience lab image.
# #
# Maintained by the NeuroFedora SIG: # Maintained by the NeuroFedora SIG:
# https://fedoraproject.org/wiki/SIGs/NeuroFedora # https://neuro.fedoraproject.org
# mailto:neuro-sig@lists.fedoraproject.org # mailto:neuro-sig@lists.fedoraproject.org
%packages %packages
@ -9,10 +9,6 @@ fedora-release-compneuro
# Includes numpy, scipy, jupyter, pandas, scikit, scipy, statsmodels, sympy, matplotlib # Includes numpy, scipy, jupyter, pandas, scikit, scipy, statsmodels, sympy, matplotlib
@python-science @python-science
# Add julia and R
R
julia
#Computational neuroscience packages #Computational neuroscience packages
arbor arbor
auryn-mpich auryn-mpich
@ -27,23 +23,23 @@ gnuplot
moose moose
nest nest
neuron neuron
neuron-devel
octave octave
# paraview paraview
python3 python3
python3-brian2 python3-brian2
python-brian2-doc
python3-ipython python3-ipython
python3-nest python3-nest
python3-netpyne python3-netpyne
python3-neuron python3-neuron
python3-libNeuroML python3-libNeuroML
python3-neo python3-neo
# Currently broken in rawhide
# python3-nineml
# python-nineml-doc
python3-PyLEMS python3-PyLEMS
python-PyLEMS-doc python3-pynn
python3-steps python3-steps
smoldyn smoldyn
# Orphaned
# python3-nineml
%end %end

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@ -2,7 +2,7 @@
# https://fedoraproject.org/wiki/Changes/Comp_Neuro_Lab # https://fedoraproject.org/wiki/Changes/Comp_Neuro_Lab
# #
# Maintained by the NeuroFedora SIG: # Maintained by the NeuroFedora SIG:
# https://fedoraproject.org/wiki/SIGs/NeuroFedora # https://neuro.fedoraproject.org
# mailto:neuro-sig@lists.fedoraproject.org # mailto:neuro-sig@lists.fedoraproject.org
%include fedora-live-workstation.ks %include fedora-live-workstation.ks

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@ -1,7 +1,7 @@
# Description: Common gnome based configuration for NeuroFedora spin images. # Description: Common gnome based configuration for NeuroFedora spin images.
# #
# Maintained by the NeuroFedora SIG: # Maintained by the NeuroFedora SIG:
# https://fedoraproject.org/wiki/SIGs/NeuroFedora # https://neuro.fedoraproject.org
# mailto:neuro-sig@lists.fedoraproject.org # mailto:neuro-sig@lists.fedoraproject.org
# Please specify the individual package sets in their own ks files: # Please specify the individual package sets in their own ks files: