From dd76b78f6d75241613ad29618d6f81e7c650bc70 Mon Sep 17 00:00:00 2001 From: "Ankur Sinha (Ankur Sinha Gmail)" Date: Mon, 15 Feb 2021 15:44:18 +0000 Subject: [PATCH] Comp-neuro lab: add new packages, remove orphaned, clean up - remove docs to reduce size - remove R and Julia to reduce size - remove orphaned nineml - add pynn - re-add paraview - add neuron-devel (required to compile NEURON mod files) Also update project URL. Signed-off-by: Ankur Sinha (Ankur Sinha Gmail) --- fedora-comp-neuro-common.ks | 20 ++++++++------------ fedora-live-comp_neuro.ks | 2 +- fedora-neuro-gnome-common.ks | 2 +- 3 files changed, 10 insertions(+), 14 deletions(-) diff --git a/fedora-comp-neuro-common.ks b/fedora-comp-neuro-common.ks index 0eca290..3a87c5c 100644 --- a/fedora-comp-neuro-common.ks +++ b/fedora-comp-neuro-common.ks @@ -1,7 +1,7 @@ # Description: Packages for the NeuroFedora computational neuroscience lab image. -# +# # Maintained by the NeuroFedora SIG: -# https://fedoraproject.org/wiki/SIGs/NeuroFedora +# https://neuro.fedoraproject.org # mailto:neuro-sig@lists.fedoraproject.org %packages @@ -9,10 +9,6 @@ fedora-release-compneuro # Includes numpy, scipy, jupyter, pandas, scikit, scipy, statsmodels, sympy, matplotlib @python-science -# Add julia and R -R -julia - #Computational neuroscience packages arbor auryn-mpich @@ -27,23 +23,23 @@ gnuplot moose nest neuron +neuron-devel octave -# paraview +paraview python3 python3-brian2 -python-brian2-doc python3-ipython python3-nest python3-netpyne python3-neuron python3-libNeuroML python3-neo -# Currently broken in rawhide -# python3-nineml -# python-nineml-doc python3-PyLEMS -python-PyLEMS-doc +python3-pynn python3-steps smoldyn +# Orphaned +# python3-nineml + %end diff --git a/fedora-live-comp_neuro.ks b/fedora-live-comp_neuro.ks index deffe9b..a6dc684 100644 --- a/fedora-live-comp_neuro.ks +++ b/fedora-live-comp_neuro.ks @@ -2,7 +2,7 @@ # https://fedoraproject.org/wiki/Changes/Comp_Neuro_Lab # # Maintained by the NeuroFedora SIG: -# https://fedoraproject.org/wiki/SIGs/NeuroFedora +# https://neuro.fedoraproject.org # mailto:neuro-sig@lists.fedoraproject.org %include fedora-live-workstation.ks diff --git a/fedora-neuro-gnome-common.ks b/fedora-neuro-gnome-common.ks index d58ac18..9f291e3 100644 --- a/fedora-neuro-gnome-common.ks +++ b/fedora-neuro-gnome-common.ks @@ -1,7 +1,7 @@ # Description: Common gnome based configuration for NeuroFedora spin images. # # Maintained by the NeuroFedora SIG: -# https://fedoraproject.org/wiki/SIGs/NeuroFedora +# https://neuro.fedoraproject.org # mailto:neuro-sig@lists.fedoraproject.org # Please specify the individual package sets in their own ks files: