2019-10-15 15:45:09 +00:00
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# Description: Packages for the NeuroFedora computational neuroscience lab image.
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#
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# Maintained by the NeuroFedora SIG:
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# https://fedoraproject.org/wiki/SIGs/NeuroFedora
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# mailto:neuro-sig@lists.fedoraproject.org
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%packages
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2020-10-27 21:17:01 +00:00
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fedora-release-compneuro
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2019-10-15 15:45:09 +00:00
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# Includes numpy, scipy, jupyter, pandas, scikit, scipy, statsmodels, sympy, matplotlib
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@python-science
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2019-11-21 16:07:06 +00:00
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# Add julia and R
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R
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julia
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2019-10-15 15:45:09 +00:00
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#Computational neuroscience packages
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2020-04-06 17:24:14 +00:00
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arbor
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2019-10-15 15:45:09 +00:00
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auryn-mpich
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auryn-openmpi
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bionetgen
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calcium-calculator
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COPASI
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qalculate
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getdp
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genesis-simulator
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gnuplot
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moose
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nest
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neuron
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octave
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2020-02-26 15:48:55 +00:00
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# paraview
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2019-10-15 15:45:09 +00:00
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python3
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python3-brian2
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python-brian2-doc
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python3-ipython
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python3-nest
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2020-11-28 18:06:18 +00:00
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python3-netpyne
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2019-10-15 15:45:09 +00:00
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python3-neuron
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python3-libNeuroML
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python3-neo
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# Currently broken in rawhide
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# python3-nineml
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# python-nineml-doc
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python3-PyLEMS
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python-PyLEMS-doc
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2020-04-06 17:24:14 +00:00
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python3-steps
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2019-10-15 15:45:09 +00:00
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smoldyn
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%end
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