Compare commits
No commits in common. "c10s" and "c8-stream-3.8" have entirely different histories.
c10s
...
c8-stream-
@ -1 +0,0 @@
|
||||
1
|
||||
46
.gitignore
vendored
46
.gitignore
vendored
@ -1,45 +1 @@
|
||||
scipy-0.7.2.tar.gz
|
||||
/scipy-0.9.0.tar.gz
|
||||
/scipy-0.10.0.tar.gz
|
||||
/scipy-0.10.1.tar.gz
|
||||
/scipy-0.11.0rc2.tar.gz
|
||||
/scipy-0.11.0.tar.gz
|
||||
/scipy-0.12.0b1.tar.gz
|
||||
/scipy-0.12.0.tar.gz
|
||||
/scipy-0.13.0b1.tar.gz
|
||||
/scipy-0.13.0rc1.tar.gz
|
||||
/scipy-0.13.0.tar.gz
|
||||
/scipy-0.13.1.tar.gz
|
||||
/scipy-0.13.2.tar.gz
|
||||
/scipy-0.13.3.tar.gz
|
||||
/scipy-0.14.0b1.tar.gz
|
||||
/scipy-0.14.0.tar.gz
|
||||
/scipy-0.14.1.tar.gz
|
||||
/scipy-0.15.1.tar.gz
|
||||
/scipy-0.16.0.tar.gz
|
||||
/scipy-0.16.1.tar.gz
|
||||
/scipy-0.17.0.tar.gz
|
||||
/scipy-0.18.0.tar.xz
|
||||
/scipy-0.19.0.tar.xz
|
||||
/scipy-0.19.1.tar.xz
|
||||
/scipy-1.0.0.tar.xz
|
||||
/scipy-1.1.0.tar.gz
|
||||
/scipy-1.2.0.tar.gz
|
||||
/scipy-1.2.1.tar.gz
|
||||
/scipy-1.3.1.tar.gz
|
||||
/scipy-1.4.1.tar.gz
|
||||
/scipy-1.5.0.tar.gz
|
||||
/scipy-1.5.2.tar.gz
|
||||
/scipy-1.5.3.tar.gz
|
||||
/scipy-1.5.4.tar.gz
|
||||
/scipy-1.6.0.tar.gz
|
||||
/scipy-1.6.1.tar.gz
|
||||
/scipy-1.6.2.tar.gz
|
||||
/scipy-1.7.0.tar.gz
|
||||
/scipy-1.7.3.tar.gz
|
||||
/scipy-1.8.0.tar.gz
|
||||
/scipy-1.8.1.tar.gz
|
||||
/scipy-1.10.0.tar.gz
|
||||
/scipy-1.10.1.tar.gz
|
||||
/scipy-1.11.1.tar.gz
|
||||
/scipy-1.11.3.tar.gz
|
||||
SOURCES/scipy-1.3.1.tar.gz
|
||||
|
||||
1
.scipy.metadata
Normal file
1
.scipy.metadata
Normal file
@ -0,0 +1 @@
|
||||
3c079c09ecb614d8056135edd1cc6da51d18df0a SOURCES/scipy-1.3.1.tar.gz
|
||||
28
19443.patch
28
19443.patch
@ -1,28 +0,0 @@
|
||||
From 28413806316049c09bb4b0182f652cce0ba82a50 Mon Sep 17 00:00:00 2001
|
||||
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
|
||||
Date: Fri, 27 Oct 2023 16:47:37 -0400
|
||||
Subject: [PATCH] TST: Fix #19442 minimally
|
||||
|
||||
Use a sorted version of the set REAL_DTYPES to parameterize
|
||||
test_b_orthonormalize.
|
||||
---
|
||||
scipy/sparse/linalg/_eigen/lobpcg/tests/test_lobpcg.py | 6 +++---
|
||||
1 file changed, 3 insertions(+), 3 deletions(-)
|
||||
|
||||
diff --git a/scipy/sparse/linalg/_eigen/lobpcg/tests/test_lobpcg.py b/scipy/sparse/linalg/_eigen/lobpcg/tests/test_lobpcg.py
|
||||
index c17d37051fca..fd6f166dc62d 100644
|
||||
--- a/scipy/sparse/linalg/_eigen/lobpcg/tests/test_lobpcg.py
|
||||
+++ b/scipy/sparse/linalg/_eigen/lobpcg/tests/test_lobpcg.py
|
||||
@@ -101,9 +101,9 @@ def test_MikotaPair():
|
||||
|
||||
@pytest.mark.parametrize("n", [50])
|
||||
@pytest.mark.parametrize("m", [1, 2, 10])
|
||||
-@pytest.mark.parametrize("Vdtype", REAL_DTYPES)
|
||||
-@pytest.mark.parametrize("Bdtype", REAL_DTYPES)
|
||||
-@pytest.mark.parametrize("BVdtype", REAL_DTYPES)
|
||||
+@pytest.mark.parametrize("Vdtype", sorted(REAL_DTYPES, key=str))
|
||||
+@pytest.mark.parametrize("Bdtype", sorted(REAL_DTYPES, key=str))
|
||||
+@pytest.mark.parametrize("BVdtype", sorted(REAL_DTYPES, key=str))
|
||||
def test_b_orthonormalize(n, m, Vdtype, Bdtype, BVdtype):
|
||||
"""Test B-orthonormalization by Cholesky with callable 'B'.
|
||||
The function '_b_orthonormalize' is key in LOBPCG but may
|
||||
28
SOURCES/acceptable_failure_rate.patch
Normal file
28
SOURCES/acceptable_failure_rate.patch
Normal file
@ -0,0 +1,28 @@
|
||||
diff --git a/scipy/conftest.py b/scipy/conftest.py
|
||||
index e5fac23..1a971e8 100644
|
||||
--- a/scipy/conftest.py
|
||||
+++ b/scipy/conftest.py
|
||||
@@ -3,6 +3,7 @@ from __future__ import division, absolute_import, print_function
|
||||
|
||||
import os
|
||||
import pytest
|
||||
+import _pytest
|
||||
import warnings
|
||||
|
||||
from distutils.version import LooseVersion
|
||||
@@ -37,3 +38,15 @@ def check_fpu_mode(request):
|
||||
warnings.warn("FPU mode changed from {0:#x} to {1:#x} during "
|
||||
"the test".format(old_mode, new_mode),
|
||||
category=FPUModeChangeWarning, stacklevel=0)
|
||||
+
|
||||
+
|
||||
+ACCEPTABLE_FAILURE_RATE = int(os.environ.get('ACCEPTABLE_FAILURE_RATE', 0))
|
||||
+
|
||||
+
|
||||
+@pytest.hookimpl()
|
||||
+def pytest_sessionfinish(session, exitstatus):
|
||||
+ if exitstatus != _pytest.main.EXIT_TESTSFAILED:
|
||||
+ return
|
||||
+ failure_rate = (100.0 * session.testsfailed) / session.testscollected
|
||||
+ if failure_rate <= ACCEPTABLE_FAILURE_RATE:
|
||||
+ session.exitstatus = 0
|
||||
140
SOURCES/ckdtree_bugfix.patch
Normal file
140
SOURCES/ckdtree_bugfix.patch
Normal file
@ -0,0 +1,140 @@
|
||||
From d945dfa4063c5cd7169acd117c15f23ba68027ed Mon Sep 17 00:00:00 2001
|
||||
From: Pauli Virtanen <pav@iki.fi>
|
||||
Date: Wed, 31 Jul 2019 23:31:22 +0300
|
||||
Subject: [PATCH 1/2] BUG: spatial: use c++11 construct for getting start of
|
||||
vector
|
||||
|
||||
gcc 9.1.1 on Fedora throws asserts and crashes at runtime on
|
||||
`&x.front()` when `x` is empty, so use a different construct for getting
|
||||
the beginning of the data block.
|
||||
---
|
||||
scipy/spatial/ckdtree.pyx | 18 +++++++++---------
|
||||
1 file changed, 9 insertions(+), 9 deletions(-)
|
||||
|
||||
diff --git a/scipy/spatial/ckdtree.pyx b/scipy/spatial/ckdtree.pyx
|
||||
index e2eea8c9097..884d49e1d34 100644
|
||||
--- a/scipy/spatial/ckdtree.pyx
|
||||
+++ b/scipy/spatial/ckdtree.pyx
|
||||
@@ -190,7 +190,7 @@ cdef class coo_entries:
|
||||
res_dtype = np.dtype(_dtype, align = True)
|
||||
n = <np.intp_t> self.buf.size()
|
||||
if NPY_LIKELY(n > 0):
|
||||
- pr = &self.buf.front()
|
||||
+ pr = self.buf.data()
|
||||
uintptr = <np.uintp_t> (<void*> pr)
|
||||
dtype = np.dtype(np.uint8)
|
||||
self.__array_interface__ = dict(
|
||||
@@ -213,7 +213,7 @@ cdef class coo_entries:
|
||||
dict res_dict
|
||||
n = <np.intp_t> self.buf.size()
|
||||
if NPY_LIKELY(n > 0):
|
||||
- pr = &self.buf.front()
|
||||
+ pr = self.buf.data()
|
||||
res_dict = dict()
|
||||
for k in range(n):
|
||||
i = pr[k].i
|
||||
@@ -263,7 +263,7 @@ cdef class ordered_pairs:
|
||||
np.intp_t n
|
||||
n = <np.intp_t> self.buf.size()
|
||||
if NPY_LIKELY(n > 0):
|
||||
- pr = &self.buf.front()
|
||||
+ pr = self.buf.data()
|
||||
uintptr = <np.uintp_t> (<void*> pr)
|
||||
dtype = np.dtype(np.intp)
|
||||
self.__array_interface__ = dict(
|
||||
@@ -284,7 +284,7 @@ cdef class ordered_pairs:
|
||||
np.intp_t i, n
|
||||
set results
|
||||
results = set()
|
||||
- pair = &self.buf.front()
|
||||
+ pair = self.buf.data()
|
||||
n = <np.intp_t> self.buf.size()
|
||||
if sizeof(long) < sizeof(np.intp_t):
|
||||
# Needed for Python 2.x on Win64
|
||||
@@ -593,7 +593,7 @@ cdef class cKDTree:
|
||||
cself = self.cself
|
||||
# finalize the tree points, this calls _post_init_traverse
|
||||
|
||||
- cself.ctree = &cself.tree_buffer.front()
|
||||
+ cself.ctree = cself.tree_buffer.data()
|
||||
|
||||
# set the size attribute after tree_buffer is built
|
||||
cself.size = cself.tree_buffer.size()
|
||||
@@ -971,7 +971,7 @@ cdef class cKDTree:
|
||||
m = <np.intp_t> (vvres[i].size())
|
||||
tmp = m * [None]
|
||||
|
||||
- cur = &vvres[i].front()
|
||||
+ cur = vvres[i].data()
|
||||
for j in range(m):
|
||||
tmp[j] = cur[0]
|
||||
cur += 1
|
||||
@@ -1067,7 +1067,7 @@ cdef class cKDTree:
|
||||
tmp = m * [None]
|
||||
with nogil:
|
||||
sort(vvres[i].begin(), vvres[i].end())
|
||||
- cur = &vvres[i].front()
|
||||
+ cur = vvres[i].data()
|
||||
for j in range(m):
|
||||
tmp[j] = cur[0]
|
||||
cur += 1
|
||||
@@ -1492,7 +1492,7 @@ cdef class cKDTree:
|
||||
cdef ckdtree * cself = self.cself
|
||||
size = cself.tree_buffer.size() * sizeof(ckdtreenode)
|
||||
|
||||
- cdef np.ndarray tree = np.asarray(<char[:size]> <char*> &cself.tree_buffer.front())
|
||||
+ cdef np.ndarray tree = np.asarray(<char[:size]> <char*> cself.tree_buffer.data())
|
||||
|
||||
state = (tree.copy(), self.data.copy(), self.n, self.m, self.leafsize,
|
||||
self.maxes, self.mins, self.indices.copy(),
|
||||
@@ -1511,7 +1511,7 @@ cdef class cKDTree:
|
||||
cself.tree_buffer = new vector[ckdtreenode]()
|
||||
cself.tree_buffer.resize(tree.size // sizeof(ckdtreenode))
|
||||
|
||||
- mytree = np.asarray(<char[:tree.size]> <char*> &cself.tree_buffer.front())
|
||||
+ mytree = np.asarray(<char[:tree.size]> <char*> cself.tree_buffer.data())
|
||||
|
||||
# set raw pointers
|
||||
self._pre_init()
|
||||
|
||||
From ad0f91438f49bfe277e32d2689aefeb0c11c789f Mon Sep 17 00:00:00 2001
|
||||
From: Pauli Virtanen <pav@iki.fi>
|
||||
Date: Wed, 31 Jul 2019 23:41:40 +0300
|
||||
Subject: [PATCH 2/2] BLD: spatial: set c++ std flags for ckdtree
|
||||
|
||||
---
|
||||
scipy/spatial/setup.py | 11 ++++++++++-
|
||||
1 file changed, 10 insertions(+), 1 deletion(-)
|
||||
|
||||
diff --git a/scipy/spatial/setup.py b/scipy/spatial/setup.py
|
||||
index d7e334876df..19d78593c5e 100644
|
||||
--- a/scipy/spatial/setup.py
|
||||
+++ b/scipy/spatial/setup.py
|
||||
@@ -4,6 +4,13 @@
|
||||
import glob
|
||||
|
||||
|
||||
+def pre_build_hook(build_ext, ext):
|
||||
+ from scipy._build_utils.compiler_helper import get_cxx_std_flag
|
||||
+ std_flag = get_cxx_std_flag(build_ext._cxx_compiler)
|
||||
+ if std_flag is not None:
|
||||
+ ext.extra_compile_args.append(std_flag)
|
||||
+
|
||||
+
|
||||
def configuration(parent_package='', top_path=None):
|
||||
from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
|
||||
from numpy.distutils.misc_util import get_info as get_misc_info
|
||||
@@ -55,10 +62,12 @@ def configuration(parent_package='', top_path=None):
|
||||
ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
|
||||
|
||||
ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
|
||||
- config.add_extension('ckdtree',
|
||||
+ ext = config.add_extension('ckdtree',
|
||||
sources=['ckdtree.cxx'] + ckdtree_src,
|
||||
depends=ckdtree_dep,
|
||||
include_dirs=inc_dirs + [join('ckdtree', 'src')])
|
||||
+ ext._pre_build_hook = pre_build_hook
|
||||
+
|
||||
# _distance_wrap
|
||||
config.add_extension('_distance_wrap',
|
||||
sources=[join('src', 'distance_wrap.c')],
|
||||
589
SOURCES/numpy-deprecation-warnings.patch
Normal file
589
SOURCES/numpy-deprecation-warnings.patch
Normal file
@ -0,0 +1,589 @@
|
||||
diff -ru scipy-1.2.1/scipy/odr/__odrpack.c scipy-1.2.1_patched/scipy/odr/__odrpack.c
|
||||
--- scipy-1.2.1/scipy/odr/__odrpack.c 2019-01-28 04:57:51.000000000 +0100
|
||||
+++ scipy-1.2.1_patched/scipy/odr/__odrpack.c 2019-06-06 16:11:32.947892754 +0200
|
||||
@@ -9,6 +9,8 @@
|
||||
*
|
||||
*/
|
||||
|
||||
+#define PY_SSIZE_T_CLEAN
|
||||
+#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION
|
||||
#include "odrpack.h"
|
||||
|
||||
|
||||
@@ -44,7 +46,7 @@
|
||||
double *fjacb, double *fjacd, int *istop)
|
||||
{
|
||||
PyObject *arg01, *arglist;
|
||||
- PyObject *result;
|
||||
+ PyObject *result = NULL;
|
||||
PyArrayObject *result_array = NULL;
|
||||
PyArrayObject *pyXplusD;
|
||||
void *beta_dst;
|
||||
@@ -57,14 +59,14 @@
|
||||
dim2[0] = *m;
|
||||
dim2[1] = *n;
|
||||
pyXplusD = (PyArrayObject *) PyArray_SimpleNew(2, dim2, NPY_DOUBLE);
|
||||
- memcpy(pyXplusD->data, (void *)xplusd, (*m) * (*n) * sizeof(double));
|
||||
+ memcpy(PyArray_DATA(pyXplusD), (void *)xplusd, (*m) * (*n) * sizeof(double));
|
||||
}
|
||||
else
|
||||
{
|
||||
npy_intp dim1[1];
|
||||
dim1[0] = *n;
|
||||
pyXplusD = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_DOUBLE);
|
||||
- memcpy(pyXplusD->data, (void *)xplusd, (*n) * sizeof(double));
|
||||
+ memcpy(PyArray_DATA(pyXplusD), (void *)xplusd, (*n) * sizeof(double));
|
||||
}
|
||||
|
||||
PyTuple_SetItem(arg01, 0, odr_global.pyBeta);
|
||||
@@ -84,7 +86,7 @@
|
||||
Py_DECREF(arg01);
|
||||
*istop = 0;
|
||||
|
||||
- beta_dst = ((PyArrayObject *) (odr_global.pyBeta))->data;
|
||||
+ beta_dst = (PyArray_DATA((PyArrayObject *) odr_global.pyBeta));
|
||||
if (beta != beta_dst) {
|
||||
memcpy(beta_dst, (void *)beta, (*np) * sizeof(double));
|
||||
}
|
||||
@@ -121,7 +123,7 @@
|
||||
"Result from function call is not a proper array of floats.");
|
||||
}
|
||||
|
||||
- memcpy((void *)f, result_array->data, (*n) * (*nq) * sizeof(double));
|
||||
+ memcpy((void *)f, PyArray_DATA(result_array), (*n) * (*nq) * sizeof(double));
|
||||
Py_DECREF(result_array);
|
||||
}
|
||||
|
||||
@@ -161,7 +163,7 @@
|
||||
{
|
||||
/* result_array should be rank-3 */
|
||||
|
||||
- if (result_array->nd != 3)
|
||||
+ if (PyArray_NDIM(result_array) != 3)
|
||||
{
|
||||
Py_DECREF(result_array);
|
||||
PYERR2(odr_error, "Beta Jacobian is not rank-3");
|
||||
@@ -171,14 +173,14 @@
|
||||
{
|
||||
/* result_array should be rank-2 */
|
||||
|
||||
- if (result_array->nd != 2)
|
||||
+ if (PyArray_NDIM(result_array) != 2)
|
||||
{
|
||||
Py_DECREF(result_array);
|
||||
PYERR2(odr_error, "Beta Jacobian is not rank-2");
|
||||
}
|
||||
}
|
||||
|
||||
- memcpy((void *)fjacb, result_array->data,
|
||||
+ memcpy((void *)fjacb, PyArray_DATA(result_array),
|
||||
(*n) * (*nq) * (*np) * sizeof(double));
|
||||
Py_DECREF(result_array);
|
||||
|
||||
@@ -220,7 +222,7 @@
|
||||
{
|
||||
/* result_array should be rank-3 */
|
||||
|
||||
- if (result_array->nd != 3)
|
||||
+ if (PyArray_NDIM(result_array) != 3)
|
||||
{
|
||||
Py_DECREF(result_array);
|
||||
PYERR2(odr_error, "xplusd Jacobian is not rank-3");
|
||||
@@ -230,7 +232,7 @@
|
||||
{
|
||||
/* result_array should be rank-2 */
|
||||
|
||||
- if (result_array->nd != 2)
|
||||
+ if (PyArray_NDIM(result_array) != 2)
|
||||
{
|
||||
Py_DECREF(result_array);
|
||||
PYERR2(odr_error, "xplusd Jacobian is not rank-2");
|
||||
@@ -240,14 +242,14 @@
|
||||
{
|
||||
/* result_array should be rank-1 */
|
||||
|
||||
- if (result_array->nd != 1)
|
||||
+ if (PyArray_NDIM(result_array) != 1)
|
||||
{
|
||||
Py_DECREF(result_array);
|
||||
PYERR2(odr_error, "xplusd Jacobian is not rank-1");
|
||||
}
|
||||
}
|
||||
|
||||
- memcpy((void *)fjacd, result_array->data,
|
||||
+ memcpy((void *)fjacd, PyArray_DATA(result_array),
|
||||
(*n) * (*nq) * (*m) * sizeof(double));
|
||||
Py_DECREF(result_array);
|
||||
}
|
||||
@@ -291,7 +293,7 @@
|
||||
return NULL;
|
||||
}
|
||||
|
||||
- lwkmn = work->dimensions[0];
|
||||
+ lwkmn = PyArray_DIMS(work)[0];
|
||||
|
||||
F_FUNC(dwinf,DWINF)(&n, &m, &np, &nq, &ldwe, &ld2we, &isodr,
|
||||
&delta, &eps, &xplus, &fn, &sd, &vcv, &rvar, &wss, &wssde,
|
||||
@@ -352,15 +354,15 @@
|
||||
wrk6--;
|
||||
wrk7--;
|
||||
|
||||
- dim1[0] = beta->dimensions[0];
|
||||
+ dim1[0] = PyArray_DIMS(beta)[0];
|
||||
sd_beta = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_DOUBLE);
|
||||
- dim2[0] = beta->dimensions[0];
|
||||
- dim2[1] = beta->dimensions[0];
|
||||
+ dim2[0] = PyArray_DIMS(beta)[0];
|
||||
+ dim2[1] = PyArray_DIMS(beta)[0];
|
||||
cov_beta = (PyArrayObject *) PyArray_SimpleNew(2, dim2, NPY_DOUBLE);
|
||||
|
||||
- memcpy(sd_beta->data, (void *)((double *)(work->data) + sd),
|
||||
+ memcpy(PyArray_DATA(sd_beta), (void *)((double *)(PyArray_DATA(work)) + sd),
|
||||
np * sizeof(double));
|
||||
- memcpy(cov_beta->data, (void *)((double *)(work->data) + vcv),
|
||||
+ memcpy(PyArray_DATA(cov_beta), (void *)((double *)(PyArray_DATA(work)) + vcv),
|
||||
np * np * sizeof(double));
|
||||
|
||||
if (!full_output)
|
||||
@@ -427,21 +429,21 @@
|
||||
fnA = (PyArrayObject *) PyArray_SimpleNew(2, dim2, NPY_DOUBLE);
|
||||
}
|
||||
|
||||
- memcpy(deltaA->data, (void *)((double *)(work->data) + delta),
|
||||
+ memcpy(PyArray_DATA(deltaA), (void *)((double *)(PyArray_DATA(work)) + delta),
|
||||
m * n * sizeof(double));
|
||||
- memcpy(epsA->data, (void *)((double *)(work->data) + eps),
|
||||
+ memcpy(PyArray_DATA(epsA), (void *)((double *)(PyArray_DATA(work)) + eps),
|
||||
nq * n * sizeof(double));
|
||||
- memcpy(xplusA->data, (void *)((double *)(work->data) + xplus),
|
||||
+ memcpy(PyArray_DATA(xplusA), (void *)((double *)(PyArray_DATA(work)) + xplus),
|
||||
m * n * sizeof(double));
|
||||
- memcpy(fnA->data, (void *)((double *)(work->data) + fn),
|
||||
+ memcpy(PyArray_DATA(fnA), (void *)((double *)(PyArray_DATA(work)) + fn),
|
||||
nq * n * sizeof(double));
|
||||
|
||||
- res_var = *((double *)(work->data) + rvar);
|
||||
- sum_square = *((double *)(work->data) + wss);
|
||||
- sum_square_delta = *((double *)(work->data) + wssde);
|
||||
- sum_square_eps = *((double *)(work->data) + wssep);
|
||||
- inv_condnum = *((double *)(work->data) + rcond);
|
||||
- rel_error = *((double *)(work->data) + eta);
|
||||
+ res_var = *((double *)(PyArray_DATA(work)) + rvar);
|
||||
+ sum_square = *((double *)(PyArray_DATA(work)) + wss);
|
||||
+ sum_square_delta = *((double *)(PyArray_DATA(work)) + wssde);
|
||||
+ sum_square_eps = *((double *)(PyArray_DATA(work)) + wssep);
|
||||
+ inv_condnum = *((double *)(PyArray_DATA(work)) + rcond);
|
||||
+ rel_error = *((double *)(PyArray_DATA(work)) + eta);
|
||||
|
||||
retobj =
|
||||
Py_BuildValue
|
||||
@@ -623,7 +625,7 @@
|
||||
PYERR(PyExc_ValueError,
|
||||
"y could not be made into a suitable array");
|
||||
}
|
||||
- n = y->dimensions[y->nd - 1]; /* pick the last dimension */
|
||||
+ n = PyArray_DIMS(y)[PyArray_NDIM(y) - 1]; /* pick the last dimension */
|
||||
if ((x =
|
||||
(PyArrayObject *) PyArray_CopyFromObject(px, NPY_DOUBLE, 1,
|
||||
2)) == NULL)
|
||||
@@ -631,18 +633,18 @@
|
||||
PYERR(PyExc_ValueError,
|
||||
"x could not be made into a suitable array");
|
||||
}
|
||||
- if (n != x->dimensions[x->nd - 1])
|
||||
+ if (n != PyArray_DIMS(x)[PyArray_NDIM(x) - 1])
|
||||
{
|
||||
PYERR(PyExc_ValueError,
|
||||
"x and y don't have matching numbers of observations");
|
||||
}
|
||||
- if (y->nd == 1)
|
||||
+ if (PyArray_NDIM(y) == 1)
|
||||
{
|
||||
nq = 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
- nq = y->dimensions[0];
|
||||
+ nq = PyArray_DIMS(y)[0];
|
||||
}
|
||||
|
||||
ldx = ldy = n;
|
||||
@@ -664,17 +666,17 @@
|
||||
"x could not be made into a suitable array");
|
||||
}
|
||||
|
||||
- n = x->dimensions[x->nd - 1];
|
||||
+ n = PyArray_DIMS(x)[PyArray_NDIM(x) - 1];
|
||||
ldx = n;
|
||||
}
|
||||
|
||||
- if (x->nd == 1)
|
||||
+ if (PyArray_NDIM(x) == 1)
|
||||
{
|
||||
m = 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
- m = x->dimensions[0];
|
||||
+ m = PyArray_DIMS(x)[0];
|
||||
} /* x, y */
|
||||
|
||||
if ((beta =
|
||||
@@ -684,14 +686,14 @@
|
||||
PYERR(PyExc_ValueError,
|
||||
"initbeta could not be made into a suitable array");
|
||||
}
|
||||
- np = beta->dimensions[0];
|
||||
+ np = PyArray_DIMS(beta)[0];
|
||||
|
||||
if (pwe == NULL)
|
||||
{
|
||||
ldwe = ld2we = 1;
|
||||
dim1[0] = n;
|
||||
we = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_DOUBLE);
|
||||
- ((double *)(we->data))[0] = -1.0;
|
||||
+ ((double *)(PyArray_DATA(we)))[0] = -1.0;
|
||||
}
|
||||
else if (PyNumber_Check(pwe) && !PyArray_Check(pwe))
|
||||
{
|
||||
@@ -711,11 +713,11 @@
|
||||
we = (PyArrayObject *) PyArray_SimpleNew(3, dim3, NPY_DOUBLE);
|
||||
if (implicit)
|
||||
{
|
||||
- ((double *)(we->data))[0] = val;
|
||||
+ ((double *)(PyArray_DATA(we)))[0] = val;
|
||||
}
|
||||
else
|
||||
{
|
||||
- ((double *)(we->data))[0] = -val;
|
||||
+ ((double *)(PyArray_DATA(we)))[0] = -val;
|
||||
}
|
||||
ldwe = ld2we = 1;
|
||||
}
|
||||
@@ -730,29 +732,29 @@
|
||||
PYERR(PyExc_ValueError, "could not convert we to a suitable array");
|
||||
}
|
||||
|
||||
- if (we->nd == 1 && nq == 1)
|
||||
+ if (PyArray_NDIM(we) == 1 && nq == 1)
|
||||
{
|
||||
|
||||
ldwe = n;
|
||||
ld2we = 1;
|
||||
}
|
||||
- else if (we->nd == 1 && we->dimensions[0] == nq)
|
||||
+ else if (PyArray_NDIM(we) == 1 && PyArray_DIMS(we)[0] == nq)
|
||||
{
|
||||
/* we is a rank-1 array with diagonal weightings to be broadcast
|
||||
* to all observations */
|
||||
ldwe = 1;
|
||||
ld2we = 1;
|
||||
}
|
||||
- else if (we->nd == 3 && we->dimensions[0] == nq
|
||||
- && we->dimensions[1] == nq && we->dimensions[2] == 1)
|
||||
+ else if (PyArray_NDIM(we) == 3 && PyArray_DIMS(we)[0] == nq
|
||||
+ && PyArray_DIMS(we)[1] == nq && PyArray_DIMS(we)[2] == 1)
|
||||
{
|
||||
/* we is a rank-3 array with the covariant weightings
|
||||
to be broadcast to all observations */
|
||||
ldwe = 1;
|
||||
ld2we = nq;
|
||||
}
|
||||
- else if (we->nd == 2 && we->dimensions[0] == nq
|
||||
- && we->dimensions[1] == nq)
|
||||
+ else if (PyArray_NDIM(we) == 2 && PyArray_DIMS(we)[0] == nq
|
||||
+ && PyArray_DIMS(we)[1] == nq)
|
||||
{
|
||||
/* we is a rank-2 array with the full covariant weightings
|
||||
to be broadcast to all observations */
|
||||
@@ -760,16 +762,16 @@
|
||||
ld2we = nq;
|
||||
}
|
||||
|
||||
- else if (we->nd == 2 && we->dimensions[0] == nq
|
||||
- && we->dimensions[1] == n)
|
||||
+ else if (PyArray_NDIM(we) == 2 && PyArray_DIMS(we)[0] == nq
|
||||
+ && PyArray_DIMS(we)[1] == n)
|
||||
{
|
||||
/* we is a rank-2 array with the diagonal elements of the
|
||||
covariant weightings for each observation */
|
||||
ldwe = n;
|
||||
ld2we = 1;
|
||||
}
|
||||
- else if (we->nd == 3 && we->dimensions[0] == nq
|
||||
- && we->dimensions[1] == nq && we->dimensions[2] == n)
|
||||
+ else if (PyArray_NDIM(we) == 3 && PyArray_DIMS(we)[0] == nq
|
||||
+ && PyArray_DIMS(we)[1] == nq && PyArray_DIMS(we)[2] == n)
|
||||
{
|
||||
/* we is the full specification of the covariant weights
|
||||
for each observation */
|
||||
@@ -788,7 +790,7 @@
|
||||
|
||||
dim1[0] = m;
|
||||
wd = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_DOUBLE);
|
||||
- ((double *)(wd->data))[0] = -1.0;
|
||||
+ ((double *)(PyArray_DATA(wd)))[0] = -1.0;
|
||||
}
|
||||
else if (PyNumber_Check(pwd) && !PyArray_Check(pwd))
|
||||
{
|
||||
@@ -806,7 +808,7 @@
|
||||
dim3[1] = 1;
|
||||
dim3[2] = m;
|
||||
wd = (PyArrayObject *) PyArray_SimpleNew(3, dim3, NPY_DOUBLE);
|
||||
- ((double *)(wd->data))[0] = -val;
|
||||
+ ((double *)(PyArray_DATA(wd)))[0] = -val;
|
||||
ldwd = ld2wd = 1;
|
||||
}
|
||||
else if (PySequence_Check(pwd))
|
||||
@@ -820,12 +822,12 @@
|
||||
PYERR(PyExc_ValueError, "could not convert wd to a suitable array");
|
||||
}
|
||||
|
||||
- if (wd->nd == 1 && m == 1)
|
||||
+ if (PyArray_NDIM(wd) == 1 && m == 1)
|
||||
{
|
||||
ldwd = n;
|
||||
ld2wd = 1;
|
||||
}
|
||||
- else if (wd->nd == 1 && wd->dimensions[0] == m)
|
||||
+ else if (PyArray_NDIM(wd) == 1 && PyArray_DIMS(wd)[0] == m)
|
||||
{
|
||||
/* wd is a rank-1 array with diagonal weightings to be broadcast
|
||||
* to all observations */
|
||||
@@ -833,16 +835,16 @@
|
||||
ld2wd = 1;
|
||||
}
|
||||
|
||||
- else if (wd->nd == 3 && wd->dimensions[0] == m
|
||||
- && wd->dimensions[1] == m && wd->dimensions[2] == 1)
|
||||
+ else if (PyArray_NDIM(wd) == 3 && PyArray_DIMS(wd)[0] == m
|
||||
+ && PyArray_DIMS(wd)[1] == m && PyArray_DIMS(wd)[2] == 1)
|
||||
{
|
||||
/* wd is a rank-3 array with the covariant wdightings
|
||||
to be broadcast to all observations */
|
||||
ldwd = 1;
|
||||
ld2wd = m;
|
||||
}
|
||||
- else if (wd->nd == 2 && wd->dimensions[0] == m
|
||||
- && wd->dimensions[1] == m)
|
||||
+ else if (PyArray_NDIM(wd) == 2 && PyArray_DIMS(wd)[0] == m
|
||||
+ && PyArray_DIMS(wd)[1] == m)
|
||||
{
|
||||
/* wd is a rank-2 array with the full covariant weightings
|
||||
to be broadcast to all observations */
|
||||
@@ -850,16 +852,16 @@
|
||||
ld2wd = m;
|
||||
}
|
||||
|
||||
- else if (wd->nd == 2 && wd->dimensions[0] == m
|
||||
- && wd->dimensions[1] == n)
|
||||
+ else if (PyArray_NDIM(wd) == 2 && PyArray_DIMS(wd)[0] == m
|
||||
+ && PyArray_DIMS(wd)[1] == n)
|
||||
{
|
||||
/* wd is a rank-2 array with the diagonal elements of the
|
||||
covariant weightings for each observation */
|
||||
ldwd = n;
|
||||
ld2wd = 1;
|
||||
}
|
||||
- else if (wd->nd == 3 && wd->dimensions[0] == m
|
||||
- && wd->dimensions[1] == m && wd->dimensions[2] == n)
|
||||
+ else if (PyArray_NDIM(wd) == 3 && PyArray_DIMS(wd)[0] == m
|
||||
+ && PyArray_DIMS(wd)[1] == m && PyArray_DIMS(wd)[2] == n)
|
||||
{
|
||||
/* wd is the full specification of the covariant weights
|
||||
for each observation */
|
||||
@@ -878,7 +880,7 @@
|
||||
{
|
||||
dim1[0] = np;
|
||||
ifixb = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_INT);
|
||||
- *(int *)(ifixb->data) = -1; /* set first element negative */
|
||||
+ *(int *)(PyArray_DATA(ifixb)) = -1; /* set first element negative */
|
||||
}
|
||||
else
|
||||
{
|
||||
@@ -892,7 +894,7 @@
|
||||
"could not convert ifixb to a suitable array");
|
||||
}
|
||||
|
||||
- if (ifixb->dimensions[0] != np)
|
||||
+ if (PyArray_DIMS(ifixb)[0] != np)
|
||||
{
|
||||
PYERR(PyExc_ValueError,
|
||||
"could not convert ifixb to a suitable array");
|
||||
@@ -904,7 +906,7 @@
|
||||
dim2[0] = m;
|
||||
dim2[1] = 1;
|
||||
ifixx = (PyArrayObject *) PyArray_SimpleNew(2, dim2, NPY_INT);
|
||||
- *(int *)(ifixx->data) = -1; /* set first element negative */
|
||||
+ *(int *)(PyArray_DATA(ifixx)) = -1; /* set first element negative */
|
||||
ldifx = 1;
|
||||
}
|
||||
else
|
||||
@@ -919,16 +921,16 @@
|
||||
"could not convert ifixx to a suitable array");
|
||||
}
|
||||
|
||||
- if (ifixx->nd == 1 && ifixx->dimensions[0] == m)
|
||||
+ if (PyArray_NDIM(ifixx) == 1 && PyArray_DIMS(ifixx)[0] == m)
|
||||
{
|
||||
ldifx = 1;
|
||||
}
|
||||
- else if (ifixx->nd == 1 && ifixx->dimensions[0] == n && m == 1)
|
||||
+ else if (PyArray_NDIM(ifixx) == 1 && PyArray_DIMS(ifixx)[0] == n && m == 1)
|
||||
{
|
||||
ldifx = n;
|
||||
}
|
||||
- else if (ifixx->nd == 2 && ifixx->dimensions[0] == m
|
||||
- && ifixx->dimensions[1] == n)
|
||||
+ else if (PyArray_NDIM(ifixx) == 2 && PyArray_DIMS(ifixx)[0] == m
|
||||
+ && PyArray_DIMS(ifixx)[1] == n)
|
||||
{
|
||||
ldifx = n;
|
||||
}
|
||||
@@ -957,14 +959,14 @@
|
||||
{
|
||||
dim1[0] = np;
|
||||
stpb = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_DOUBLE);
|
||||
- *(double *)(stpb->data) = 0.0;
|
||||
+ *(double *)(PyArray_DATA(stpb)) = 0.0;
|
||||
}
|
||||
else /* pstpb is a sequence */
|
||||
{
|
||||
if ((stpb =
|
||||
(PyArrayObject *) PyArray_CopyFromObject(pstpb, NPY_DOUBLE, 1,
|
||||
1)) == NULL
|
||||
- || stpb->dimensions[0] != np)
|
||||
+ || PyArray_DIMS(stpb)[0] != np)
|
||||
{
|
||||
PYERR(PyExc_ValueError,
|
||||
"could not convert stpb to a suitable array");
|
||||
@@ -976,7 +978,7 @@
|
||||
dim2[0] = 1;
|
||||
dim2[1] = m;
|
||||
stpd = (PyArrayObject *) PyArray_SimpleNew(2, dim2, NPY_DOUBLE);
|
||||
- *(double *)(stpd->data) = 0.0;
|
||||
+ *(double *)(PyArray_DATA(stpd)) = 0.0;
|
||||
ldstpd = 1;
|
||||
}
|
||||
else
|
||||
@@ -989,16 +991,16 @@
|
||||
"could not convert stpb to a suitable array");
|
||||
}
|
||||
|
||||
- if (stpd->nd == 1 && stpd->dimensions[0] == m)
|
||||
+ if (PyArray_NDIM(stpd) == 1 && PyArray_DIMS(stpd)[0] == m)
|
||||
{
|
||||
ldstpd = 1;
|
||||
}
|
||||
- else if (stpd->nd == 1 && stpd->dimensions[0] == n && m == 1)
|
||||
+ else if (PyArray_NDIM(stpd) == 1 && PyArray_DIMS(stpd)[0] == n && m == 1)
|
||||
{
|
||||
ldstpd = n;
|
||||
}
|
||||
- else if (stpd->nd == 2 && stpd->dimensions[0] == n &&
|
||||
- stpd->dimensions[1] == m)
|
||||
+ else if (PyArray_NDIM(stpd) == 2 && PyArray_DIMS(stpd)[0] == n &&
|
||||
+ PyArray_DIMS(stpd)[1] == m)
|
||||
{
|
||||
ldstpd = n;
|
||||
}
|
||||
@@ -1008,14 +1010,14 @@
|
||||
{
|
||||
dim1[0] = np;
|
||||
sclb = (PyArrayObject *) PyArray_SimpleNew(1, dim1, NPY_DOUBLE);
|
||||
- *(double *)(sclb->data) = 0.0;
|
||||
+ *(double *)(PyArray_DATA(sclb)) = 0.0;
|
||||
}
|
||||
else /* psclb is a sequence */
|
||||
{
|
||||
if ((sclb =
|
||||
(PyArrayObject *) PyArray_CopyFromObject(psclb, NPY_DOUBLE, 1,
|
||||
1)) == NULL
|
||||
- || sclb->dimensions[0] != np)
|
||||
+ || PyArray_DIMS(sclb)[0] != np)
|
||||
{
|
||||
PYERR(PyExc_ValueError,
|
||||
"could not convert sclb to a suitable array");
|
||||
@@ -1027,7 +1029,7 @@
|
||||
dim2[0] = 1;
|
||||
dim2[1] = n;
|
||||
scld = (PyArrayObject *) PyArray_SimpleNew(2, dim2, NPY_DOUBLE);
|
||||
- *(double *)(scld->data) = 0.0;
|
||||
+ *(double *)(PyArray_DATA(scld)) = 0.0;
|
||||
ldscld = 1;
|
||||
}
|
||||
else
|
||||
@@ -1040,16 +1042,16 @@
|
||||
"could not convert stpb to a suitable array");
|
||||
}
|
||||
|
||||
- if (scld->nd == 1 && scld->dimensions[0] == m)
|
||||
+ if (PyArray_NDIM(scld) == 1 && PyArray_DIMS(scld)[0] == m)
|
||||
{
|
||||
ldscld = 1;
|
||||
}
|
||||
- else if (scld->nd == 1 && scld->dimensions[0] == n && m == 1)
|
||||
+ else if (PyArray_NDIM(scld) == 1 && PyArray_DIMS(scld)[0] == n && m == 1)
|
||||
{
|
||||
ldscld = n;
|
||||
}
|
||||
- else if (scld->nd == 2 && scld->dimensions[0] == n &&
|
||||
- scld->dimensions[1] == m)
|
||||
+ else if (PyArray_NDIM(scld) == 2 && PyArray_DIMS(scld)[0] == n &&
|
||||
+ PyArray_DIMS(scld)[1] == m)
|
||||
{
|
||||
ldscld = n;
|
||||
}
|
||||
@@ -1110,9 +1112,9 @@
|
||||
PYERR(PyExc_ValueError,
|
||||
"could not convert work to a suitable array");
|
||||
}
|
||||
- if (work->dimensions[0] < lwork)
|
||||
+ if (PyArray_DIMS(work)[0] < lwork)
|
||||
{
|
||||
- printf("%d %d\n", work->dimensions[0], lwork);
|
||||
+ printf("%ld %d\n", PyArray_DIMS(work)[0], lwork);
|
||||
PYERR(PyExc_ValueError, "work is too small");
|
||||
}
|
||||
}
|
||||
@@ -1133,7 +1135,7 @@
|
||||
"could not convert iwork to a suitable array");
|
||||
}
|
||||
|
||||
- if (iwork->dimensions[0] < liwork)
|
||||
+ if (PyArray_DIMS(iwork)[0] < liwork)
|
||||
{
|
||||
PYERR(PyExc_ValueError, "iwork is too small");
|
||||
}
|
||||
@@ -1170,19 +1172,18 @@
|
||||
Py_INCREF(beta);
|
||||
odr_global.extra_args = extra_args;
|
||||
Py_XINCREF(extra_args);
|
||||
-
|
||||
- /* now call DODRC */
|
||||
- F_FUNC(dodrc,DODRC)(fcn_callback, &n, &m, &np, &nq, (double *)(beta->data),
|
||||
- (double *)(y->data), &ldy, (double *)(x->data), &ldx,
|
||||
- (double *)(we->data), &ldwe, &ld2we,
|
||||
- (double *)(wd->data), &ldwd, &ld2wd,
|
||||
- (int *)(ifixb->data), (int *)(ifixx->data), &ldifx,
|
||||
- &job, &ndigit, &taufac, &sstol, &partol, &maxit,
|
||||
- &iprint, &lunerr, &lunrpt,
|
||||
- (double *)(stpb->data), (double *)(stpd->data), &ldstpd,
|
||||
- (double *)(sclb->data), (double *)(scld->data), &ldscld,
|
||||
- (double *)(work->data), &lwork, (int *)(iwork->data), &liwork,
|
||||
- &info);
|
||||
+ /* now call DODRC */
|
||||
+ F_FUNC(dodrc,DODRC)(fcn_callback, &n, &m, &np, &nq, (double *)(PyArray_DATA(beta)),
|
||||
+ (double *)(PyArray_DATA(y)), &ldy, (double *)(PyArray_DATA(x)), &ldx,
|
||||
+ (double *)(PyArray_DATA(we)), &ldwe, &ld2we,
|
||||
+ (double *)(PyArray_DATA(wd)), &ldwd, &ld2wd,
|
||||
+ (int *)(PyArray_DATA(ifixb)), (int *)(PyArray_DATA(ifixx)), &ldifx,
|
||||
+ &job, &ndigit, &taufac, &sstol, &partol, &maxit,
|
||||
+ &iprint, &lunerr, &lunrpt,
|
||||
+ (double *)(PyArray_DATA(stpb)), (double *)(PyArray_DATA(stpd)), &ldstpd,
|
||||
+ (double *)(PyArray_DATA(sclb)), (double *)(PyArray_DATA(scld)), &ldscld,
|
||||
+ (double *)(PyArray_DATA(work)), &lwork, (int *)(PyArray_DATA(iwork)), &liwork,
|
||||
+ &info);
|
||||
|
||||
result = gen_output(n, m, np, nq, ldwe, ld2we,
|
||||
beta, work, iwork, isodr, info, full_output);
|
||||
@ -1,95 +1,69 @@
|
||||
# without means enabled
|
||||
%bcond_with doc
|
||||
|
||||
# Pythran is an optional build dependency.
|
||||
# When used, it makes some modules faster,
|
||||
# but it is usually not available soon enough for new major Python versions.
|
||||
%if 0%{?rhel}
|
||||
%bcond_with pythran
|
||||
%bcond_with pooch
|
||||
%else
|
||||
%bcond_without pythran
|
||||
%bcond_without pooch
|
||||
%endif
|
||||
|
||||
# The code is not safe to build with LTO
|
||||
%global _lto_cflags %{nil}
|
||||
|
||||
%ifarch %{ix86}
|
||||
# On i686, there is a confusion whether Fortran INTEGER should be
|
||||
# translated as int or long.
|
||||
# <https://github.com/scipy/scipy/issues/19993>
|
||||
%global build_type_safety_c 2
|
||||
%endif
|
||||
%bcond_with tests
|
||||
|
||||
# Set to pre-release version suffix if building pre-release, else %%{nil}
|
||||
%global rcver %{nil}
|
||||
|
||||
%if 0%{?fedora} >= 33 || 0%{?rhel} >= 9
|
||||
%global blaslib flexiblas
|
||||
%global blasvar %{nil}
|
||||
%else
|
||||
%global blaslib openblas
|
||||
%global blasvar p
|
||||
%endif
|
||||
|
||||
Summary: Scientific Tools for Python
|
||||
Name: scipy
|
||||
Version: 1.11.3
|
||||
Release: 17%{?dist}
|
||||
Version: 1.3.1
|
||||
Release: 5%{?dist}
|
||||
|
||||
# BSD-3-Clause -- whole package except:
|
||||
# BSD-2-Clause -- scipy/_lib/_pep440.py
|
||||
# scipy/_lib/decorator.py
|
||||
# scipy/optimize/lbfgsb_src
|
||||
# scipy/special/_ellip_harm.pxd
|
||||
# MIT -- scipy/cluster/_optimal_leaf_ordering.pyx
|
||||
# scipy/io/_idl.py
|
||||
# scipy/linalg/_basic.py (in part)
|
||||
# scipy/optimize/_highs
|
||||
# scipy/optimize/_lbfgsb_py.py
|
||||
# scipy/optimize/_tnc.py
|
||||
# scipy/optimize/_trlib
|
||||
# scipy/optimize/tnc
|
||||
# scipy/special/Faddeeva.{cc,hh}
|
||||
# BSL-1.0 -- scipy/_lib/boost_math
|
||||
# scipy/special/cephes
|
||||
# Boehm-GC -- scipy/sparse/linalg/_dsolve/SuperLU
|
||||
# Qhull -- scipy/spatial/qhull_src
|
||||
# LicenseRef-Fedora-Public-Domain -- scipy/odr/__odrpack.c
|
||||
License: BSD-3-Clause AND BSD-2-Clause AND MIT AND BSL-1.0 AND Boehm-GC AND Qhull AND LicenseRef-Fedora-Public-Domain
|
||||
# BSD -- whole package except:
|
||||
# Boost -- scipy/special/cephes/scipy_iv.c
|
||||
# Public Domain -- scipy/odr/__odrpack.c
|
||||
License: BSD and Boost and Public Domain
|
||||
Url: http://www.scipy.org/scipylib/index.html
|
||||
Source0: https://github.com/scipy/scipy/releases/download/v%{version}/scipy-%{version}.tar.gz
|
||||
|
||||
# TST: Fix #19442 minimally
|
||||
# https://github.com/scipy/scipy/pull/19443
|
||||
#
|
||||
# Fixes:
|
||||
#
|
||||
# BUG: Error collecting tests due to inconsistent parameterization order in
|
||||
# test_b_orthonormalize
|
||||
# https://github.com/scipy/scipy/issues/19442
|
||||
Patch: https://github.com/scipy/scipy/pull/19443.patch
|
||||
# Previously we ignored the tests results, because they don't always pass
|
||||
# Instead of ignoring the results entirely, we allow certain failure rate
|
||||
# https://stackoverflow.com/a/47731333/1839451
|
||||
Patch0: acceptable_failure_rate.patch
|
||||
|
||||
BuildRequires: %{blaslib}-devel
|
||||
BuildRequires: gcc-gfortran, gcc-c++
|
||||
# The C API of PyArrayObject has changed in Python 3.8 and the
|
||||
# structure fields accessed in __odrpack.c are now deprecated.
|
||||
Patch1: numpy-deprecation-warnings.patch
|
||||
|
||||
BuildRequires: pybind11-devel
|
||||
BuildRequires: python3-devel, python3-numpy-f2py
|
||||
# Bugfix of cKDTree
|
||||
# PR: https://github.com/scipy/scipy/pull/10567
|
||||
# Issue: https://github.com/scipy/scipy/issues/11021
|
||||
Patch2: ckdtree_bugfix.patch
|
||||
|
||||
BuildRequires: python3-pytest
|
||||
BuildRequires: python3-pytest-timeout
|
||||
%if ! 0%{?rhel}
|
||||
BuildRequires: python3-pytest-xdist
|
||||
# Exclude i686 arch. Due to a modularity issue it's being added to the
|
||||
# x86_64 compose of CRB, but we don't want to ship it at all.
|
||||
# See: https://projects.engineering.redhat.com/browse/RCM-72605
|
||||
ExcludeArch: i686
|
||||
|
||||
BuildRequires: fftw-devel, blas-devel, lapack-devel, suitesparse-devel
|
||||
%ifarch %{openblas_arches}
|
||||
BuildRequires: openblas-devel
|
||||
%else
|
||||
BuildRequires: atlas-devel
|
||||
%endif
|
||||
%if %{with pooch}
|
||||
BuildRequires: python3-pooch
|
||||
BuildRequires: gcc-gfortran, swig, gcc-c++
|
||||
BuildRequires: qhull-devel
|
||||
BuildRequires: /usr/bin/pathfix3.8.py
|
||||
|
||||
BuildRequires: python%{python3_pkgversion}-devel
|
||||
BuildRequires: python%{python3_pkgversion}-numpy
|
||||
BuildRequires: python%{python3_pkgversion}-numpy-f2py
|
||||
BuildRequires: python%{python3_pkgversion}-setuptools
|
||||
BuildRequires: python%{python3_pkgversion}-Cython
|
||||
BuildRequires: python%{python3_pkgversion}-rpm-macros
|
||||
|
||||
%if %{with tests}
|
||||
BuildRequires: python%{python3_pkgversion}-pytest
|
||||
BuildRequires: python%{python3_pkgversion}-pytest-xdist
|
||||
BuildRequires: python%{python3_pkgversion}-pytest-timeout
|
||||
%endif
|
||||
|
||||
%if %{with doc}
|
||||
BuildRequires: python3-sphinx
|
||||
BuildRequires: python3-matplotlib
|
||||
BuildRequires: python3-numpydoc
|
||||
BuildRequires: python%{python3_pkgversion}-sphinx
|
||||
BuildRequires: python%{python3_pkgversion}-matplotlib
|
||||
BuildRequires: python%{python3_pkgversion}-numpydoc
|
||||
%endif
|
||||
|
||||
%global _description %{expand:
|
||||
@ -105,438 +79,136 @@ leading scientists and engineers.}
|
||||
|
||||
%description %_description
|
||||
|
||||
%package -n python3-scipy
|
||||
%package -n python%{python3_pkgversion}-scipy
|
||||
Summary: Scientific Tools for Python
|
||||
Requires: python3-numpy, python3-f2py
|
||||
%if %{with pooch}
|
||||
Requires: python3-pooch
|
||||
%endif
|
||||
Provides: bundled(arpack) = 3.3.0
|
||||
Provides: bundled(biasedurn)
|
||||
Provides: bundled(boost-math)
|
||||
Provides: bundled(coin-or-HiGHS) = 1.2
|
||||
Provides: bundled(Faddeeva)
|
||||
Provides: bundled(id)
|
||||
Provides: bundled(l-bfgs-b) = 3.0
|
||||
Provides: bundled(LAPJVsp)
|
||||
Provides: bundled(python3-decorator) = 4.0.5
|
||||
Provides: bundled(python3-pep440)
|
||||
Provides: bundled(python3-pypocketfft) = bf2c431c21213b7c5e23c2f542009b0bd3ec1445
|
||||
Provides: bundled(qhull) = 2019.1
|
||||
Provides: bundled(SuperLU) = 5.2.0
|
||||
Provides: bundled(unuran) = 1.8.1
|
||||
%description -n python3-scipy %_description
|
||||
Requires: python%{python3_pkgversion}-numpy, python%{python3_pkgversion}-numpy-f2py
|
||||
%{?python_provide:%python_provide python%{python3_pkgversion}-scipy}
|
||||
%description -n python%{python3_pkgversion}-scipy %_description
|
||||
|
||||
%if %{with doc}
|
||||
%package -n python3-scipy-doc
|
||||
%package -n python%{python3_pkgversion}-scipy-doc
|
||||
Summary: Scientific Tools for Python - documentation
|
||||
Requires: python3-scipy = %{version}-%{release}
|
||||
%description -n python3-scipy-doc
|
||||
Requires: python%{python3_pkgversion}-scipy = %{version}-%{release}
|
||||
%description -n python%{python3_pkgversion}-scipy-doc
|
||||
HTML documentation for Scipy
|
||||
%endif
|
||||
|
||||
%package -n python3-scipy-tests
|
||||
Summary: Scientific Tools for Python - test files
|
||||
Requires: python3-scipy = %{version}-%{release}
|
||||
Requires: python3-pytest
|
||||
%description -n python3-scipy-tests
|
||||
Scipy test files
|
||||
|
||||
%prep
|
||||
%autosetup -p1 -n %{name}-%{version}%{?rcver}
|
||||
cat > site.cfg << EOF
|
||||
|
||||
# Remove pythran dependency if not explicitly required
|
||||
%if %{without pythran}
|
||||
sed -i '/pythran/d' pyproject.toml
|
||||
[amd]
|
||||
library_dirs = %{_libdir}
|
||||
include_dirs = /usr/include/suitesparse
|
||||
amd_libs = amd
|
||||
|
||||
[umfpack]
|
||||
library_dirs = %{_libdir}
|
||||
include_dirs = /usr/include/suitesparse
|
||||
umfpack_libs = umfpack
|
||||
|
||||
%ifarch %{openblas_arches}
|
||||
[openblas]
|
||||
libraries = openblasp
|
||||
library_dirs = %{_libdir}
|
||||
%endif
|
||||
%if %{without pooch}
|
||||
sed -i 's/, "pooch"]/]/g' pyproject.toml
|
||||
sed -i '/pooch/d' pyproject.toml
|
||||
%endif
|
||||
|
||||
cat >> pyproject.toml << EOF
|
||||
|
||||
[tool.meson-python.args]
|
||||
setup = ['-Dblas=%{blaslib}%{blasvar}', '-Dlapack=%{blaslib}%{blasvar}'%{!?with_pythran:, '-Duse-pythran=false'}]
|
||||
EOF
|
||||
|
||||
# Enable build with Python 3.13+
|
||||
# Upstream only allows Python pre-releases in git HEAD, not in releases.
|
||||
# However in Fedora, we actively build packages with Python pre-releases very soon.
|
||||
sed -i 's/requires-python = ">=3.9,<3.13"/requires-python = ">=3.9"/' pyproject.toml
|
||||
|
||||
# Docs won't build unless the .dat files are specified here
|
||||
sed -i 's/metadata = dict(/metadata = dict(package_data={"": ["*.dat"]},/' _setup.py
|
||||
sed -i 's/metadata = dict(/metadata = dict(package_data={"": ["*.dat"]},/' setup.py
|
||||
|
||||
# remove bundled numpydoc
|
||||
rm doc/sphinxext -r
|
||||
|
||||
rm $(grep -rl '/\* Generated by Cython') PKG-INFO
|
||||
|
||||
# numpy no longer contains a copy of distutils
|
||||
for f in $(grep -Frl numpy.distutils); do
|
||||
sed -i.orig 's/numpy\.\(distutils\)/\1/g' $f
|
||||
touch -r $f.orig $f
|
||||
rm $f.orig
|
||||
done
|
||||
|
||||
# Do not do benchmarking or coverage testing for RPM builds
|
||||
sed -i '/^[[:blank:]]*"(asv|pytest-cov)"/d' pyproject.toml
|
||||
|
||||
# No scikit-umfpack in Fedora
|
||||
sed -i '/^[[:blank:]]*"scikit-umfpack"/d' pyproject.toml
|
||||
|
||||
# No pytest-xdist in RHEL
|
||||
%if 0%{?rhel}
|
||||
sed -i '/^[[:blank:]]*"pytest-xdist"/d' pyproject.toml
|
||||
%endif
|
||||
|
||||
# Loosen the lower bound on numpy
|
||||
sed -i "/numpy.*python_version=='3.12'/s/1\.26\.0/1\.24\.4/" pyproject.toml
|
||||
|
||||
# Loosen the upper bound on meson-python
|
||||
sed -i '/meson-python/s/0\.15\.0/0\.16\.0/' pyproject.toml
|
||||
|
||||
# Loosen the upper bound on Cython
|
||||
sed -i '/Cython/s/3\.0/3\.1/' pyproject.toml
|
||||
|
||||
# Loosen the upper bound on pybind11
|
||||
sed -i '/pybind11/s/2\.11\.1/2.12.0/' pyproject.toml
|
||||
|
||||
# Work around failure to detect open_memstream. In glibc, open_memstream is
|
||||
# not a real function. It is a weak alias to __open_memstream.
|
||||
sed -i "s/\('has_openmemstream', \)'0'/\1'1'/" scipy/_lib/meson.build
|
||||
|
||||
%generate_buildrequires
|
||||
%pyproject_buildrequires -R
|
||||
|
||||
%build
|
||||
%pyproject_wheel
|
||||
for PY in %{python3_version}; do
|
||||
env CFLAGS="$RPM_OPT_FLAGS -lm" \
|
||||
FFLAGS="$RPM_OPT_FLAGS -fPIC -cpp" \
|
||||
LDFLAGS="$RPM_LD_FLAGS -shared" \
|
||||
%{_bindir}/python$PY setup.py config_fc \
|
||||
--fcompiler=gnu95 --noarch \
|
||||
build
|
||||
|
||||
%if %{with doc}
|
||||
for PY in %{python3_version}; do
|
||||
pushd doc
|
||||
export PYTHONPATH=$(echo ../build/lib.linux-*-$PY/)
|
||||
make html SPHINXBUILD=sphinx-build-$PY
|
||||
rm -rf build/html/.buildinfo
|
||||
mv build build-$PY
|
||||
popd
|
||||
done
|
||||
%endif
|
||||
done
|
||||
|
||||
%install
|
||||
%pyproject_install
|
||||
%pyproject_save_files scipy
|
||||
|
||||
%py3_install
|
||||
# Some files got ambiguous python shebangs, we fix them after everything else is done
|
||||
%py3_shebang_fix %{buildroot}%{python3_sitearch}
|
||||
|
||||
# Fix executable bits
|
||||
chmod 0755 %{buildroot}%{python3_sitearch}/scipy/sparse/linalg/_isolve/tests/test_gcrotmk.py
|
||||
pathfix3.8.py -pni "%{__python3} %{py3_shbang_opts}" %{buildroot}%{python3_sitearch}
|
||||
|
||||
%if %{with tests}
|
||||
%check
|
||||
# check against the reference BLAS/LAPACK
|
||||
export FLEXIBLAS=netlib
|
||||
|
||||
# default test timeout
|
||||
TIMEOUT=500
|
||||
|
||||
# TestDatasets try to download from the internet
|
||||
SKIP_ALL="not TestDatasets"
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL'"
|
||||
|
||||
%ifarch ppc64le
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL and \
|
||||
not test_eigs and \
|
||||
not test_gees_trexc and \
|
||||
not test_gees_trsen and \
|
||||
not test_trexc_NAG and \
|
||||
not test_trsen_NAG and \
|
||||
not test_real_nonsymmetric_modes and \
|
||||
not test_real_eigs_real_k_subset and \
|
||||
not test_ticket_1459_arpack_crash'"
|
||||
TIMEOUT=1000
|
||||
%endif
|
||||
|
||||
%ifarch aarch64
|
||||
# TestConstructUtils::test_concatenate_int32_overflow is flaky on aarch64
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL and \
|
||||
not test_concatenate_int32_overflow'"
|
||||
TIMEOUT=1000
|
||||
%endif
|
||||
|
||||
# Skip all tests on s390x because they hangs unexpectedly and randomly
|
||||
# and pytest-timeout has no effect. Note that the outcome of the tests
|
||||
# was previously ignored anyway so by disabling the test for s390x we
|
||||
# are not doing anything more dangerous.
|
||||
%ifarch s390x
|
||||
# https://bugzilla.redhat.com/show_bug.cgi?id=1959353
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL and \
|
||||
not test_distance_transform_cdt05'"
|
||||
TIMEOUT=1000
|
||||
exit 0
|
||||
%endif
|
||||
|
||||
%ifarch x86_64
|
||||
%if 0%{?rhel}
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL and \
|
||||
not test_list_of_problems and \
|
||||
not test_gh7799'"
|
||||
%endif
|
||||
export ACCEPTABLE_FAILURE_RATE=0
|
||||
%else
|
||||
# there are usually 10-21 test failing, so we allow 1% failure rate
|
||||
export ACCEPTABLE_FAILURE_RATE=1
|
||||
%endif
|
||||
|
||||
%ifarch i686
|
||||
# https://github.com/scipy/scipy/issues/17213
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL and \
|
||||
not test_gh12218 and \
|
||||
not test_examples and \
|
||||
not test_shifts and \
|
||||
not test_svdp'"
|
||||
%ifarch ppc64le
|
||||
# test_decomp segfaults on ppc64le
|
||||
export k="not test_denormals and not test_decomp"
|
||||
%else
|
||||
# test_denormals tends to stuck
|
||||
export k="not test_denormals"
|
||||
%endif
|
||||
|
||||
%ifarch riscv64
|
||||
export PYTEST_ADDOPTS="-k '$SKIP_ALL and \
|
||||
not TestSchur and \
|
||||
not test_gejsv_general and \
|
||||
not test_kendall_p_exact_large and \
|
||||
not test_gejsv_edge_arguments and \
|
||||
not test_gh12999 and \
|
||||
not test_propack and \
|
||||
not test_milp and \
|
||||
not test_gejsv_NAG'"
|
||||
%endif
|
||||
# Do not create -PYTEST.pyc files
|
||||
export PYTHONDONTWRITEBYTECODE=1
|
||||
|
||||
pushd %{buildroot}/%{python3_sitearch}
|
||||
# Ignoring the datasets tests as we don't have the optional pooch
|
||||
# dependency on RHEL.
|
||||
%{pytest} %{!?with_pooch:--ignore=scipy/datasets/tests/test_data.py} --timeout=${TIMEOUT} scipy %{?!rhel:--numprocesses=auto}
|
||||
# TODO TestIQR.test_scale fails on Python 3.8+ due to some warnings, investigate
|
||||
%{__python3} -m pytest --timeout=300 -k "$k and not (TestIQR and test_scale)" scipy --numprocesses=auto
|
||||
# Remove test remnants
|
||||
rm -rf gram{A,B}
|
||||
rm -rf .pytest_cache
|
||||
popd
|
||||
%endif
|
||||
|
||||
%files -n python3-scipy -f %{pyproject_files}
|
||||
%license LICENSE.txt LICENSES_bundled.txt
|
||||
%exclude %{python3_sitearch}/scipy/*/tests/
|
||||
%exclude %{python3_sitearch}/scipy/*/*/tests/
|
||||
%exclude %{python3_sitearch}/scipy/*/*/*/tests/
|
||||
%exclude %{python3_sitearch}/scipy/*/*/*/*/tests/
|
||||
|
||||
%files -n python3-scipy-tests
|
||||
%{python3_sitearch}/scipy/*/tests/
|
||||
%{python3_sitearch}/scipy/*/*/tests/
|
||||
%{python3_sitearch}/scipy/*/*/*/tests/
|
||||
%{python3_sitearch}/scipy/*/*/*/*/tests/
|
||||
%files -n python%{python3_pkgversion}-scipy
|
||||
%doc LICENSE.txt
|
||||
%{python3_sitearch}/scipy/
|
||||
%{python3_sitearch}/*.egg-info
|
||||
|
||||
%if %{with doc}
|
||||
%files -n python3-scipy-doc
|
||||
%files -n python%{python3_pkgversion}-scipy-doc
|
||||
%license LICENSE.txt
|
||||
%doc doc/build-%{python3_version}/html
|
||||
%endif
|
||||
|
||||
%changelog
|
||||
* Tue Oct 29 2024 Troy Dawson <tdawson@redhat.com> - 1.11.3-17
|
||||
- Bump release for October 2024 mass rebuild:
|
||||
Resolves: RHEL-64018
|
||||
|
||||
* Wed Oct 02 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-16
|
||||
- Waive annocheck results: --skip-implicit-values
|
||||
- Resolves: RHEL-33519
|
||||
|
||||
* Mon Jul 29 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-15
|
||||
- Waive annocheck results: --skip-fortify and --skip-lto
|
||||
- Resolves: RHEL-33519
|
||||
|
||||
* Thu Jun 27 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-14
|
||||
- rebuilt
|
||||
|
||||
* Wed Jun 26 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-13
|
||||
- Waive annocheck results: --skip-fortify and --skip-lto
|
||||
- Resolves: RHEL-33519
|
||||
|
||||
* Mon Jun 24 2024 Troy Dawson <tdawson@redhat.com> - 1.11.3-12
|
||||
- Bump release for June 2024 mass rebuild
|
||||
|
||||
* Fri Jun 07 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-11
|
||||
- Fix python-pooch not fully removed
|
||||
- Resolves: RHEL-35429
|
||||
|
||||
* Fri Jun 07 2024 Richard W.M. Jones <rjones@redhat.com> - 1.11.3-10
|
||||
- Enable riscv64
|
||||
|
||||
* Tue May 28 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-9
|
||||
- Remove python-pooch optional dependency from RHEL
|
||||
- Related: RHELMISC-5321
|
||||
|
||||
* Thu May 02 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-8
|
||||
- Build without pythran in RHEL by default
|
||||
- Resolves: RHEL-33955
|
||||
|
||||
* Fri Apr 26 2024 Pavel Simovec <psimovec@redhat.com> - 1.11.3-7
|
||||
- Fully remove pythran dependency
|
||||
- Resolves: RHEL-33955
|
||||
|
||||
* Tue Jan 30 2024 Miro Hrončok <mhroncok@redhat.com> - 1.11.3-6
|
||||
- Skip fewer tests during build
|
||||
|
||||
* Mon Jan 29 2024 Florian Weimer <fweimer@redhat.com> - 1.11.3-5
|
||||
- Disable incompatible-pointer-types errors on i686 (#2258823)
|
||||
|
||||
* Sat Jan 27 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.11.3-4
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
|
||||
|
||||
* Thu Nov 30 2023 Karolina Surma <ksurma@redhat.com> - 1.11.3-3
|
||||
- Fix the build without pythran
|
||||
|
||||
* Wed Nov 01 2023 Benjamin A. Beasley <code@musicinmybrain.net> - 1.11.3-2
|
||||
- Patch error collecting tests with pytest-xdist
|
||||
|
||||
* Wed Oct 11 2023 Jerry James <loganjerry@gmail.com> - 1.11.3-1
|
||||
- New upstream release 1.11.3
|
||||
resolves: #2211813
|
||||
- Convert License tag to SPDX
|
||||
- Add Provides for bundled projects
|
||||
- Disable LTO
|
||||
- Pythran works on 32-bit architectures again
|
||||
- Fix detection of open_memstream
|
||||
- Use pyproject macros instead of the deprecated py3 macros
|
||||
- Reenable some tests that work again
|
||||
- Remove unused BuildRequires
|
||||
|
||||
* Wed Jul 12 2023 psimovec <psimovec@redhat.com> - 1.11.1-1
|
||||
- New upstream release 1.11.1
|
||||
resolves: #2211813
|
||||
- Separate tests into subpackage python3-scipy-tests
|
||||
|
||||
* Mon Jul 10 2023 Python Maint <python-maint@redhat.com> - 1.10.1-5
|
||||
- Rebuilt for Python 3.12
|
||||
|
||||
* Wed Jun 14 2023 Python Maint <python-maint@redhat.com> - 1.10.1-4
|
||||
- Bootstrap for Python 3.12
|
||||
|
||||
* Tue May 23 2023 Yaakov Selkowitz <yselkowi@redhat.com> - 1.10.1-3
|
||||
- Avoid pytest-xdist dependency in RHEL builds
|
||||
|
||||
* Wed Mar 15 2023 Pavel Šimovec <psimovec@redhat.com> - 1.10.1-2
|
||||
- Remove workaround for linking issue on x86_64
|
||||
- resolves: #2068530
|
||||
|
||||
* Wed Feb 22 2023 Pavel Šimovec <psimovec@redhat.com> - 1.10.1-1
|
||||
- New upstream release 1.10.1
|
||||
resolves: #2101172
|
||||
- Use the optional python3-pooch dependency
|
||||
|
||||
* Sat Jan 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.8.1-7
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
|
||||
|
||||
* Sat Jul 23 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.8.1-6
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
|
||||
|
||||
* Sun Jul 3 2022 Mamoru TASAKA <mtasaka@fedoraproject.org> - 1.8.1-5
|
||||
- Fix linalg.lapack syevr segfault (#2099102)
|
||||
|
||||
* Fri Jun 17 2022 Python Maint <python-maint@redhat.com> - 1.8.1-4
|
||||
- Rebuilt for Python 3.11
|
||||
|
||||
* Tue Jun 14 2022 Python Maint <python-maint@redhat.com> - 1.8.1-3
|
||||
- Bootstrap for Python 3.11
|
||||
|
||||
* Tue Jun 14 2022 Python Maint <python-maint@redhat.com> - 1.8.1-2
|
||||
- Rebuilt for Python 3.11
|
||||
|
||||
* Thu Jun 09 2022 Nikola Forró <nforro@redhat.com> - 1.8.1-1
|
||||
- New upstream release 1.8.1
|
||||
resolves: #2088437
|
||||
|
||||
* Sat Mar 26 2022 Nikola Forró <nforro@redhat.com> - 1.8.0-3
|
||||
- Skip test_cython_api also on armv7hl
|
||||
|
||||
* Sat Mar 26 2022 Nikola Forró <nforro@redhat.com> - 1.8.0-2
|
||||
- Disable pythran on armv7hl as well
|
||||
|
||||
* Mon Feb 07 2022 Nikola Forró <nforro@redhat.com> - 1.8.0-1
|
||||
- New upstream release 1.8.0
|
||||
resolves: #2035126
|
||||
|
||||
* Sat Jan 22 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.7.3-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
|
||||
|
||||
* Tue Dec 21 2021 Nikola Forró <nforro@redhat.com> - 1.7.3-1
|
||||
- New upstream release 1.7.3
|
||||
resolves: #1988883
|
||||
|
||||
* Fri Jul 23 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.7.0-3
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
|
||||
|
||||
* Wed Jul 14 2021 Miro Hrončok <mhroncok@redhat.com> - 1.7.0-2
|
||||
- Use the optional Pythran build dependency
|
||||
|
||||
* Wed Jun 23 2021 Nikola Forró <nforro@redhat.com> - 1.7.0-1
|
||||
- New upstream release 1.7.0
|
||||
resolves: #1953422
|
||||
|
||||
* Fri Jun 04 2021 Python Maint <python-maint@redhat.com> - 1.6.2-4
|
||||
- Rebuilt for Python 3.10
|
||||
|
||||
* Fri Apr 23 2021 Nikola Forró <nforro@redhat.com> - 1.6.2-3
|
||||
* Fri Jul 14 2023 Charalampos Stratakis <cstratak@redhat.com> - 1.3.1-5
|
||||
- Remove RPATH from certain shared object files
|
||||
- Resolves: rhbz#2222717
|
||||
|
||||
* Tue Mar 30 2021 Jonathan Wakely <jwakely@redhat.com> - 1.6.2-2
|
||||
- Rebuilt for removed libstdc++ symbol (#1937698)
|
||||
* Thu Dec 12 2019 Tomas Orsava <torsava@redhat.com> - 1.3.1-4
|
||||
- Exclude unsupported i686 arch
|
||||
|
||||
* Thu Mar 25 2021 Nikola Forró <nforro@redhat.com> - 1.6.2-1
|
||||
- New upstream release 1.6.2
|
||||
resolves: #1942896
|
||||
* Tue Dec 03 2019 Lumír Balhar <lbalhar@redhat.com> - 1.3.1-3
|
||||
- Specify LDFLAGS explicitly
|
||||
- Force preprocessing of Fortran sources to make annobin record proper flags
|
||||
- Resolves: rhbz#1778983
|
||||
|
||||
* Thu Feb 18 2021 Nikola Forró <nforro@redhat.com> - 1.6.1-1
|
||||
- New upstream release 1.6.1
|
||||
resolves: #1929994
|
||||
|
||||
* Wed Feb 03 2021 Nikola Forró <nforro@redhat.com> - 1.6.0-3
|
||||
- Increase test timeout on s390x
|
||||
|
||||
* Wed Jan 27 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.6.0-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
|
||||
|
||||
* Mon Jan 04 2021 Nikola Forró <nforro@redhat.com> - 1.6.0-1
|
||||
- New upstream release 1.6.0
|
||||
resolves: #1906692
|
||||
|
||||
* Wed Nov 25 2020 Nikola Forró <nforro@redhat.com> - 1.5.4-2
|
||||
- Skip factorial() float tests on Python 3.10
|
||||
resolves: #1898157
|
||||
|
||||
* Thu Nov 05 2020 Nikola Forró <nforro@redhat.com> - 1.5.4-1
|
||||
- New upstream release 1.5.4
|
||||
- Increase test timeout, 300 seconds is not always enough
|
||||
for test_logpdf_overflow on s390x
|
||||
resolves: #1894887
|
||||
|
||||
* Mon Oct 19 2020 Nikola Forró <nforro@redhat.com> - 1.5.3-1
|
||||
- New upstream release 1.5.3
|
||||
resolves: #1889132
|
||||
|
||||
* Wed Sep 30 2020 Nikola Forró <nforro@redhat.com> - 1.5.2-2
|
||||
- Skip one more test expected to fail on 32-bit architectures
|
||||
|
||||
* Mon Aug 31 2020 Nikola Forró <nforro@redhat.com> - 1.5.2-1
|
||||
- New upstream release 1.5.2
|
||||
resolves: #1853871 and #1840077
|
||||
|
||||
* Sun Aug 16 2020 Iñaki Úcar <iucar@fedoraproject.org> - 1.5.0-4
|
||||
- https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager
|
||||
|
||||
* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.5.0-3
|
||||
- Second attempt - Rebuilt for
|
||||
https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
|
||||
|
||||
* Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.5.0-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
|
||||
|
||||
* Tue Jun 23 2020 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 1.5.0-1
|
||||
- Update to latest version
|
||||
|
||||
* Mon May 25 2020 Miro Hrončok <mhroncok@redhat.com> - 1.4.1-2
|
||||
- Rebuilt for Python 3.9
|
||||
|
||||
* Sun Mar 01 2020 Orion Poplawski <orion@nwra.com> - 1.4.1-1
|
||||
- Update to 1.4.1 (bz#1771154)
|
||||
- Workaround FTBFS with gcc 10 (bz#1800078)
|
||||
|
||||
* Thu Jan 30 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.1-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
|
||||
* Thu Nov 21 2019 Lumír Balhar <lbalhar@redhat.com> - 1.3.1-2
|
||||
- Adjusted for Python 3.8 module in RHEL 8
|
||||
|
||||
* Fri Oct 18 2019 Miro Hrončok <mhroncok@redhat.com> - 1.3.1-1
|
||||
- Update to 1.3.1 (#1674101)
|
||||
@ -1,7 +0,0 @@
|
||||
--- !Policy
|
||||
|
||||
product_versions:
|
||||
- rhel-10
|
||||
decision_context: osci_compose_gate
|
||||
rules:
|
||||
- !PassingTestCaseRule {test_case_name: osci.brew-build.tier0.functional}
|
||||
@ -1,11 +0,0 @@
|
||||
discover:
|
||||
- name: Smoke-tests
|
||||
how: shell
|
||||
tests:
|
||||
- name: python-import-test
|
||||
test: python3 -c 'import scipy'
|
||||
require:
|
||||
- python3-scipy
|
||||
duration: 1m
|
||||
execute:
|
||||
how: tmt
|
||||
@ -1,3 +0,0 @@
|
||||
annocheck:
|
||||
extra_opts:
|
||||
- hardened: --skip-fortify --skip-lto --skip-implicit-values
|
||||
Loading…
Reference in New Issue
Block a user