Initial import

LICENSE

@@ -0,0 +1,19 @@
+Copyright (c) 2015 Sandro Mani <manisandro@gmail.com>
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.

mpi.attrs

@@ -0,0 +1,5 @@
+%__mpi_provides %{_rpmconfigdir}/mpi.prov %{buildroot} %{?__filter_GLIBC_PRIVATE:--filter-private}
+%__mpi_requires %{_rpmconfigdir}/mpi.req %{buildroot} %{?__filter_GLIBC_PRIVATE:--filter-private}
+%__mpi_path ^%{_prefix}/lib(64)?/(openmpi|mpich)/.*$
+%__elf_exclude_path ^%{_prefix}/lib(64)?/(openmpi|mpich)/.*$
+%__libsymlink_exclude_path ^%{_prefix}/lib(64)?/(openmpi|mpich)/.*$

mpi.prov

@@ -0,0 +1,83 @@
+#!/bin/bash
+
+# Copyright (c) 2015 Sandro Mani <manisandro@gmail.com>
+#
+# Permission is hereby granted, free of charge, to any person obtaining a copy
+# of this software and associated documentation files (the "Software"), to deal
+# in the Software without restriction, including without limitation the rights
+# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+# copies of the Software, and to permit persons to whom the Software is
+# furnished to do so, subject to the following conditions:
+#
+# The above copyright notice and this permission notice shall be included in
+# all copies or substantial portions of the Software.
+#
+# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+# THE SOFTWARE
+
+
+# First argument is buildroot
+buildroot="$1"
+if [ ! -d "$buildroot" ]; then
+  >&2 echo "Invalid buildroot"
+  exit 1
+fi
+
+# Second argument can be --filter-private
+filterprivate=
+if [ "$2" == "--filter-private" ]; then
+  filterprivate="--filter-private"
+fi
+
+# Search for all MPI implementations:
+# - Search all modules which start with mpi
+# - For each module, store $MPI_HOME -> $MPI_COMPILER in assoc. array
+declare -A mpi_compier_for_home
+if [ -e /etc/profile.d/modules.sh ]; then
+  . /etc/profile.d/modules.sh;
+
+  # Add moduledirs in buildroot also for cases where an MPI implementation
+  # package is being built, meaning that its module files are not yet installed
+  IFS=':' read -ra _MODULEPATH <<< "$MODULEPATH"
+  for i in "${!_MODULEPATH[@]}"; do
+    _MODULEPATH[$i]=$buildroot${_MODULEPATH[$i]}
+  done
+  export MODULEPATH="$MODULEPATH:$(IFS=:; echo "${_MODULEPATH[*]}")"
+
+  for module in $(module -t avail 2>&1 | grep "^mpi/"); do
+    module load $module
+    mpi_compier_for_home[${MPI_HOME}]=${MPI_COMPILER}
+    module unload $module
+  done
+fi
+
+# Read file list from stdin
+filelist=$(sed "s/['\"]/\\\&/g")
+
+# List provides:
+if [ -x /usr/lib/rpm/elfdeps -a -n "$filelist" ]; then
+  for file in $(echo $filelist | tr '[:blank:]' \\n); do
+
+    # Get the default provides string from elfdeps
+    prov=$(echo $file | /usr/lib/rpm/elfdeps --provides $filterprivate)
+    if [ -z $prov ]; then
+      continue
+    fi
+
+    # If the path to the scanned binary starts with an $MPI_HOME, append the
+    # corresponding ($MPI_COMPILER) to the provides string
+    for mpi_home in "${!mpi_compier_for_home[@]}"; do
+      if [[ "$file" == "$buildroot$mpi_home"* ]]; then
+        prov="${prov}(${mpi_compier_for_home[$mpi_home]})"
+        break
+      fi
+    done
+
+    echo "$prov"
+  done
+fi

mpi.req

@@ -0,0 +1,97 @@
+#!/bin/bash
+
+# Copyright (c) 2015 Sandro Mani <manisandro@gmail.com>
+#
+# Permission is hereby granted, free of charge, to any person obtaining a copy
+# of this software and associated documentation files (the "Software"), to deal
+# in the Software without restriction, including without limitation the rights
+# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+# copies of the Software, and to permit persons to whom the Software is
+# furnished to do so, subject to the following conditions:
+#
+# The above copyright notice and this permission notice shall be included in
+# all copies or substantial portions of the Software.
+#
+# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+# THE SOFTWARE
+
+
+# First argument is buildroot
+buildroot="$1"
+if [ ! -d "$buildroot" ]; then
+  >&2 echo "Invalid buildroot"
+  exit 1
+fi
+
+# Second argument can be --filter-private
+filterprivate=
+if [ "$1" == "--filter-private" ]; then
+  filterprivate="--filter-private"
+fi
+
+# Search for all MPI implementations:
+# - Search all modules which start with mpi
+# - For each module, store $MPI_HOME -> $MPI_COMPILER and
+#   $MPI_COMPILER -> $MPI_LIB in assoc. array
+declare -A mpi_compier_for_home
+declare -A mpi_lib_for_compiler
+if [ -e /etc/profile.d/modules.sh ]; then
+  . /etc/profile.d/modules.sh;
+
+  # Add moduledirs in buildroot also for cases where an MPI implementation
+  # package is being built, meaning that its module files are not yet installed
+  IFS=':' read -ra _MODULEPATH <<< "$MODULEPATH"
+  for i in "${!_MODULEPATH[@]}"; do
+    _MODULEPATH[$i]=$buildroot${_MODULEPATH[$i]}
+  done
+  export MODULEPATH="$MODULEPATH:$(IFS=:; echo "${_MODULEPATH[*]}")"
+
+  for module in $(module -t avail 2>&1 | grep "^mpi/"); do
+    module load $module
+    mpi_compier_for_home[${MPI_HOME}]=${MPI_COMPILER}
+    mpi_lib_for_compiler[${MPI_COMPILER}]=${MPI_LIB}
+    module unload $module
+  done
+fi
+
+# Read file list from stdin
+filelist=`sed "s/[]['\"*?{}]/\\\\\&/g"`
+
+# List requires:
+if [ -x /usr/lib/rpm/elfdeps -a -n "$filelist" ]; then
+  for file in $(echo $filelist | tr '[:blank:]' \\n); do
+
+    # Get the default requres string from elfdeps
+    reqs=$(echo $file | /usr/lib/rpm/elfdeps --requires $filterprivate)
+
+    # Check whether the scanned binary is inside an $MPI_HOME dir
+    mpi_comp=
+    for mpi_home in "${!mpi_compier_for_home[@]}"; do
+      if [[ "$file" == "$buildroot$mpi_home"* ]]; then
+        mpi_comp="${mpi_compier_for_home[$mpi_home]}"
+        break
+      fi
+    done
+
+    # If the scanned binary is inside an $MPI_HOME, for each dependency, check
+    # whether the library exists in $MPI_LIB, and if yes, append
+    # ($MPI_COMPILER) to each requires string
+    if [ ! -z $mpi_comp ]; then
+      mpi_lib=${mpi_lib_for_compiler[$mpi_comp]}
+      for req in $reqs; do
+        lib=$(echo $req | grep -Eo '^.*\.so[^(]*')
+        if [ ! -z $lib ] && ( [ -e $mpi_lib/$lib ] || [ -e $buildroot$mpi_lib/$lib ] ); then
+          req="${req}($mpi_comp)"
+        fi
+        echo "$req"
+      done
+    else
+      echo "$reqs"
+    fi
+  done
+fi

rpm-mpi-hooks.spec

@@ -0,0 +1,60 @@
+Name:           rpm-mpi-hooks
+Version:        1.0
+Release:        4%{?dist}
+Summary:        RPM dependency generator hooks for MPI packages
+
+License:        MIT
+BuildArch:      noarch
+
+Source0:        mpi.attrs
+Source1:        mpi.prov
+Source2:        mpi.req
+Source3:        LICENSE
+
+Requires:       filesystem
+Requires:       rpm-build
+# Instead of adding a BuildRequires to every MPI implementation spec
+Requires:       environment-modules
+
+%description
+RPM dependency generator hooks for MPI packages. This package should be added
+as a BuildRequires to all mpi implementations (i.e. openmpi, mpich) as well as
+a Requires to the their -devel packages.
+
+
+%prep
+cp -a %SOURCE3 .
+
+
+%build
+# Nothing to build
+
+
+%install
+install -Dpm 0644 %{SOURCE0} %{buildroot}%{_rpmconfigdir}/fileattrs/mpi.attr
+install -Dpm 0755 %{SOURCE1} %{buildroot}%{_rpmconfigdir}/mpi.prov
+install -Dpm 0755 %{SOURCE2} %{buildroot}%{_rpmconfigdir}/mpi.req
+
+
+%files
+%license LICENSE
+%{_rpmconfigdir}/fileattrs/mpi.attr
+%{_rpmconfigdir}/mpi.req
+%{_rpmconfigdir}/mpi.prov
+
+
+%changelog
+* Thu Jul 09 2015 Sandro Mani <manisandro@gmail.com> 1.0-4
+- mpi.prov, mpi.req: Use "module -t avail" instead of "module avail"
+- mpi.prov, mpi.req: Also look in moduledirs in %%buildroot
+- mpi.attrs: add %%__libsymlink_exclude_path
+
+* Thu Jul 09 2015 Sandro Mani <manisandro@gmail.com> 1.0-3
+- Add LICENSE
+
+* Thu Jul 09 2015 Sandro Mani <manisandro@gmail.com> 1.0-2
+- BuildRequires: rpm -> rpm-build
+- Change license to MIT
+
+* Thu Jul 09 2015 Sandro Mani <manisandro@gmail.com> 1.0-1
+- Initial package