re-import sources as agreed with the maintainer
This commit is contained in:
parent
00a993e8d1
commit
d668cc4be0
6
.gitignore
vendored
6
.gitignore
vendored
@ -1,2 +1,6 @@
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SOURCES/networkx-1.11.tar.gz
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/networkx_reference.pdf
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/networkx_tutorial.pdf
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/networkx-documentation.zip
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/networkx-1.9.1.tar.gz
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/networkx-1.10.tar.gz
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/networkx-1.11.tar.gz
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20
networkx-numpy.patch
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20
networkx-numpy.patch
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With recent versions of numpy, the original expression results in:
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TypeError: Cannot cast ufunc add output from dtype('float64') to dtype('int64')
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with casting rule 'same_kind'
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This patch solves the issue by not trying to add in place.
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diff -Naur networkx-networkx-1.10.orig/networkx/linalg/algebraicconnectivity.py networkx-networkx-1.10/networkx/linalg/algebraicconnectivity.py
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--- networkx-networkx-1.10.orig/networkx/linalg/algebraicconnectivity.py 2015-10-30 15:41:35.000000000 -0600
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+++ networkx-networkx-1.10/networkx/linalg/algebraicconnectivity.py 2015-12-01 09:49:51.568953316 -0700
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@@ -244,8 +244,7 @@
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W -= (W.T * X * X.T).T
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project(W)
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# Compute the diagonal of P * L * P as a Jacobi preconditioner.
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- D = L.diagonal()
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- D += 2. * (asarray(X) * asarray(W)).sum(axis=1)
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+ D = L.diagonal() + 2. * (asarray(X) * asarray(W)).sum(axis=1)
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D += (asarray(X) * asarray(X * (W.T * X))).sum(axis=1)
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D[D < tol * Lnorm] = 1.
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D = 1. / D
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63
tests/examples/Makefile
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63
tests/examples/Makefile
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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#
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# Makefile of /examples
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# Description: Run some of the examples from upstream sources
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# Author: Petr Lautrbach <plautrba@redhat.com>
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#
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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#
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# Copyright (c) 2019 Red Hat, Inc.
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#
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# This program is free software: you can redistribute it and/or
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# modify it under the terms of the GNU General Public License as
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# published by the Free Software Foundation, either version 2 of
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# the License, or (at your option) any later version.
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#
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# This program is distributed in the hope that it will be
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# useful, but WITHOUT ANY WARRANTY; without even the implied
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# warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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# PURPOSE. See the GNU General Public License for more details.
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#
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# You should have received a copy of the GNU General Public License
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# along with this program. If not, see http://www.gnu.org/licenses/.
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#
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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export TEST=/examples
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export TESTVERSION=1.0
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BUILT_FILES=
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FILES=$(METADATA) runtest.sh Makefile PURPOSE tests.list
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.PHONY: all install download clean
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run: $(FILES) build
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./runtest.sh
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build: $(BUILT_FILES)
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test -x runtest.sh || chmod a+x runtest.sh
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clean:
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rm -f *~ $(BUILT_FILES)
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include /usr/share/rhts/lib/rhts-make.include
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$(METADATA): Makefile
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@echo "Owner: Petr Lautrbach <plautrba@redhat.com>" > $(METADATA)
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@echo "Name: $(TEST)" >> $(METADATA)
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@echo "TestVersion: $(TESTVERSION)" >> $(METADATA)
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@echo "Path: $(TEST_DIR)" >> $(METADATA)
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@echo "Description: Run some of the examples from upstream sources" >> $(METADATA)
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@echo "Type: Sanity" >> $(METADATA)
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@echo "TestTime: 30m" >> $(METADATA)
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@echo "RunFor: examples" >> $(METADATA)
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@echo "Requires: examples" >> $(METADATA)
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@echo "Priority: Normal" >> $(METADATA)
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@echo "License: GPLv2+" >> $(METADATA)
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@echo "Confidential: no" >> $(METADATA)
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@echo "Destructive: no" >> $(METADATA)
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@echo "Releases: -RHEL4 -RHELClient5 -RHELServer5 -RHELServer6 -RHELServer7" >> $(METADATA)
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rhts-lint $(METADATA)
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3
tests/examples/PURPOSE
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3
tests/examples/PURPOSE
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PURPOSE of /examples
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Description: Run some of the examples from upstream sources
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Author: Petr Lautrbach <plautrba@redhat.com>
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51
tests/examples/runtest.sh
Executable file
51
tests/examples/runtest.sh
Executable file
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#!/bin/bash
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# vim: dict+=/usr/share/beakerlib/dictionary.vim cpt=.,w,b,u,t,i,k
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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#
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# runtest.sh of /examples
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# Description: Run some of the examples from upstream sources
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# Author: Petr Lautrbach <plautrba@redhat.com>
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#
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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#
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# Copyright (c) 2019 Red Hat, Inc.
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#
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# This program is free software: you can redistribute it and/or
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# modify it under the terms of the GNU General Public License as
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# published by the Free Software Foundation, either version 2 of
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# the License, or (at your option) any later version.
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#
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# This program is distributed in the hope that it will be
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# useful, but WITHOUT ANY WARRANTY; without even the implied
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# warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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# PURPOSE. See the GNU General Public License for more details.
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#
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# You should have received a copy of the GNU General Public License
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# along with this program. If not, see http://www.gnu.org/licenses/.
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#
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# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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# Include Beaker environment
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. /usr/bin/rhts-environment.sh || exit 1
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. /usr/share/beakerlib/beakerlib.sh || exit 1
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PACKAGE="python3-networkx"
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EXAMPLES="/usr/share/doc/python3-networkx-core/examples"
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rlJournalStart
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rlPhaseStartSetup
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rlAssertRpm $PACKAGE
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rlPhaseEnd
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for test in `cat tests.list`; do
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rlPhaseStartTest $test
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dir=${test/\/*/}
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script=${test/*\//}
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cd $EXAMPLES/$dir
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rlRun "python3 $script" 0
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cd -
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rlPhaseEnd
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done
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rlJournalPrintText
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rlJournalEnd
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19
tests/examples/tests.list
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19
tests/examples/tests.list
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advanced/heavy_metal_umlaut.py
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advanced/iterated_dynamical_systems.py
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advanced/parallel_betweenness.py
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algorithms/davis_club.py
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algorithms/krackhardt_centrality.py
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algorithms/rcm.py
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basic/properties.py
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basic/read_write.py
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drawing/chess_masters.py
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drawing/knuth_miles.py
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graph/degree_sequence.py
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graph/erdos_renyi.py
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graph/expected_degree_sequence.py
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graph/karate_club.py
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graph/knuth_miles.py
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graph/napoleon_russian_campaign.py
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graph/roget.py
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graph/words.py
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multigraph/chess_masters.py
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12
tests/tests.yml
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12
tests/tests.yml
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- hosts: localhost
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tags:
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- classic
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- container
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roles:
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- role: standard-test-source
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- role: standard-test-beakerlib
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required_packages:
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- python3-networkx
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tests:
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- examples
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