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update to 1.3.1

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This commit is contained in:
Tom Callaway 2009-04-14 20:55:48 +00:00
parent b501635158
commit e500ef7605
3 changed files with 134 additions and 66 deletions
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6
.cvsignore
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@ -1,5 +1 @@
openmpi-1.0.1.tar.bz2 openmpi-1.3.1.tar.bz2
openmpi-1.0.2.tar.bz2
openmpi-1.1.tar.bz2
openmpi-1.2.3.tar.bz2
openmpi-1.2.4.tar.bz2

164
openmpi.spec
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@ -1,39 +1,24 @@
Name: openmpi Name: openmpi
Version: 1.2.4 Version: 1.3.1
Release: 3%{?dist} Release: 1%{?dist}
Summary: Open Message Passing Interface Summary: Open Message Passing Interface
Group: Development/Libraries Group: Development/Libraries
License: BSD License: BSD
URL: http://www.open-mpi.org/ URL: http://www.open-mpi.org/
Source0: http://www.open-mpi.org/software/ompi/v1.2/downloads/%{name}-%{version}.tar.bz2 Source0: http://www.open-mpi.org/software/ompi/v1.3/downloads/%{name}-%{version}.tar.bz2
Source1: openmpi.pc.in Source1: openmpi.pc.in
Source2: openmpi.module.in Source2: openmpi.module.in
Patch0: openmpi-1.2.4-open.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n) BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: gcc-gfortran, libtool, numactl-devel, libtorque-devel BuildRequires: gcc-gfortran, libtool, numactl-devel, libtorque-devel
#BuildRequires: libibverbs-devel, opensm-devel #BuildRequires: libibverbs-devel, opensm-devel
#%ifnarch ppc #%ifnarch ppc
#BuildRequires: dapl-devel #BuildRequires: dapl-devel
#%endif #%endif
Requires(post): /sbin/ldconfig, /usr/sbin/alternatives Requires(post): /sbin/ldconfig
Requires(preun): /usr/sbin/alternatives Requires(post): %{_sbindir}/update-alternatives
Requires(preun): %{_sbindir}/update-alternatives
Requires: %{name}-libs = %{version}-%{release} Requires: %{name}-libs = %{version}-%{release}
%package libs
Summary: Libraries used by openmpi programs
Group: Development/Libraries
Requires(post): /usr/sbin/alternatives
Requires(preun): /usr/sbin/alternatives
%package devel
Summary: Development files for openmpi
Group: Development/Libraries
Requires: %{name}-libs = %{version}-%{release}
Provides: mpi-devel
Requires(post): /usr/sbin/alternatives
Requires(preun): /usr/sbin/alternatives
%description %description
Open MPI is an open source, freely available implementation of both the Open MPI is an open source, freely available implementation of both the
MPI-1 and MPI-2 standards, combining technologies and resources from MPI-1 and MPI-2 standards, combining technologies and resources from
@ -43,11 +28,41 @@ compliant implementation, Open MPI offers advantages for system and
software vendors, application developers, and computer science software vendors, application developers, and computer science
researchers. For more information, see http://www.open-mpi.org/ . researchers. For more information, see http://www.open-mpi.org/ .
%package libs
Summary: Libraries used by openmpi programs
Group: Development/Libraries
Requires(post): %{_sbindir}/update-alternatives
Requires(preun): %{_sbindir}/update-alternatives
%description libs %description libs
Contains shared libraries used by openmpi applications Contains shared libraries used by openmpi applications.
%package devel
Summary: Development files for openmpi
Group: Development/Libraries
Requires: %{name}-libs = %{version}-%{release}
Provides: mpi-devel = %{version}-%{release}
Requires(post): %{_sbindir}/update-alternatives
Requires(preun): %{_sbindir}/update-alternatives
%description devel %description devel
Contains development headers and libraries for openmpi Contains development headers and libraries for openmpi.
%package vt
Summary: VampirTrace versions of openmpi programs
Group: Development/Libraries
Requires: %{name}-libs = %{version}-%{release}
%description vt
VampirTrace consists of a tool set and a run-time library for instrumentation
and tracing of software applications. In particular, it is tailored towards
parallel and distributed High Performance Computing (HPC) applications.
The instrumentation part modifies a given application in order to inject
additional measurement calls during run-time. The tracing part provides the
actual measurement functionality used by the instrumentation calls. By this
means, a variety of detailed performance properties can be collected and
recorded during run-time. This package contains the openmpi programs
with VampirTrace enabled.
# We only compile with gcc, but other people may want other compilers. # We only compile with gcc, but other people may want other compilers.
# Set the compiler here. # Set the compiler here.
@ -71,7 +86,7 @@ Contains development headers and libraries for openmpi
# in default arch packages (aka, the x86_64 package). There are, however, # in default arch packages (aka, the x86_64 package). There are, however,
# some arches that don't support forcing *any* mode, those we just leave # some arches that don't support forcing *any* mode, those we just leave
# undefined. # undefined.
%ifarch i386 ppc %ifarch i386 ppc sparcv9
%define mode 32 %define mode 32
%define modeflag -m32 %define modeflag -m32
%endif %endif
@ -84,7 +99,7 @@ Contains development headers and libraries for openmpi
%ifarch s390x %ifarch s390x
%define mode 64 %define mode 64
%endif %endif
%ifarch x86_64 ppc64 %ifarch x86_64 ppc64 sparc64
%define mode 64 %define mode 64
%define modeflag -m64 %define modeflag -m64
%endif %endif
@ -93,7 +108,7 @@ Contains development headers and libraries for openmpi
# Usually, that means 64bit preferred over 32bit on multilib, but ppc is an # Usually, that means 64bit preferred over 32bit on multilib, but ppc is an
# exception in that 32bit is preferred over 64bit. So, the priority values # exception in that 32bit is preferred over 64bit. So, the priority values
# selected here make that happen. # selected here make that happen.
%ifarch i386 ppc64 s390 %ifarch i386 ppc64 s390 sparc64
%define priority 10 %define priority 10
%else %else
%define priority 11 %define priority 11
@ -105,10 +120,6 @@ Contains development headers and libraries for openmpi
%prep %prep
%setup -q %setup -q
# Kill the stack protection and fortify source stuff...it slows things down
# and openmpi hasn't been audited for it yet
#RPM_OPT_FLAGS=`echo $RPM_OPT_FLAGS | sed -e 's/-Wp,-D_FORTIFY_SOURCE=.//' | sed -e 's/-fstack-protector//'`
%patch0 -p1
%ifarch x86_64 %ifarch x86_64
XFLAGS="-fPIC" XFLAGS="-fPIC"
@ -118,7 +129,6 @@ XFLAGS="-fPIC"
--libdir=%{_libdir}/%{mpidir} \ --libdir=%{_libdir}/%{mpidir} \
--datadir=%{_datadir}/%{mpidir}/help%{mode} \ --datadir=%{_datadir}/%{mpidir}/help%{mode} \
--mandir=%{_datadir}/%{mpidir}/man \ --mandir=%{_datadir}/%{mpidir}/man \
--with-libnuma=%{_libdir} \
--with-threads=posix \ --with-threads=posix \
--with-tm \ --with-tm \
CC=%{opt_cc} \ CC=%{opt_cc} \
@ -178,14 +188,41 @@ echo %{_libdir}/%{mpidir} > ${RPM_BUILD_ROOT}%{_libdir}/%{mpidir}/%{name}.ld.con
# Make the pkgconfig files # Make the pkgconfig files
mkdir -p ${RPM_BUILD_ROOT}%{_libdir}/pkgconfig; mkdir -p ${RPM_BUILD_ROOT}%{_libdir}/pkgconfig;
sed 's#@NAME@#'%{name}'#g;s#@VERSION@#'%{version}'#g;s#@LIBDIR@#'%{_libdir}'#g;s#@INCLUDEDIR@#'%{_includedir}'#g;s#@MODE@#'%{mode}'#g;s#@CC@#'%{opt_cc}'#g;s#@MPIDIR@#'%{mpidir}'#g;s#@MODEFLAG@#'%{?modeflag}'#g' < %SOURCE1 > ${RPM_BUILD_ROOT}/%{_libdir}/pkgconfig/%{name}-%{version}-%{opt_cc}-%{mode}.pc; sed 's#@NAME@#'%{name}'#g;s#@VERSION@#'%{version}'#g;s#@LIBDIR@#'%{_libdir}'#g;s#@INCLUDEDIR@#'%{_includedir}'#g;s#@MODE@#'%{mode}'#g;s#@CC@#'%{opt_cc}'#g;s#@MPIDIR@#'%{mpidir}'#g;s#@MODEFLAG@#'%{?modeflag}'#g' < %SOURCE1 > ${RPM_BUILD_ROOT}/%{_libdir}/pkgconfig/%{name}-%{version}-%{opt_cc}-%{mode}.pc;
sed 's#@NAME@#'%{name}'#g;s#@VERSION@#'%{version}'#g;s#@LIBDIR@#'%{_libdir}'#g;s#@INCLUDEDIR@#'%{_includedir}'#g;s#@MODE@#'%{mode}'#g;s#@CC@#'%{opt_cc}'#g;s#@MPIDIR@#'%{mpidir}'#g;s#@MODEFLAG@#'%{?modeflag}'#g' < %SOURCE2 > ${RPM_BUILD_ROOT}/%{_libdir}/%{mpidir}/%{name}.module; sed 's#@NAME@#'%{name}'#g;s#@VERSION@#'%{version}'#g;s#@LIBDIR@#'%{_libdir}'#g;s#@INCLUDEDIR@#'%{_includedir}'#g;s#@DATADIR@#'%{_datadir}'#g;s#@MODE@#'%{mode}'#g;s#@CC@#'%{opt_cc}'#g;s#@MPIDIR@#'%{mpidir}'#g;s#@MODEFLAG@#'%{?modeflag}'#g' < %SOURCE2 > ${RPM_BUILD_ROOT}/%{_libdir}/%{mpidir}/%{name}.module;
# Ghost files for alternatives
touch ${RPM_BUILD_ROOT}%{_bindir}/mpirun
touch ${RPM_BUILD_ROOT}%{_bindir}/mpiexec
mkdir -p ${RPM_BUILD_ROOT}%{_mandir}/man1/
touch ${RPM_BUILD_ROOT}%{_mandir}/man1/mpirun.1.gz
touch ${RPM_BUILD_ROOT}%{_mandir}/man1/mpiexec.1.gz
mkdir -p ${RPM_BUILD_ROOT}%{_sysconfdir}/ld.so.conf.d/
touch ${RPM_BUILD_ROOT}%{_sysconfdir}/ld.so.conf.d/mpi%{mode}.conf
touch ${RPM_BUILD_ROOT}%{_bindir}/mpicc
touch ${RPM_BUILD_ROOT}%{_bindir}/mpic++
touch ${RPM_BUILD_ROOT}%{_bindir}/mpiCC
touch ${RPM_BUILD_ROOT}%{_bindir}/mpicxx
touch ${RPM_BUILD_ROOT}%{_bindir}/mpif77
touch ${RPM_BUILD_ROOT}%{_bindir}/mpif90
# Clean up static libs
rm -rf ${RPM_BUILD_ROOT}%{_libdir}/%{mpidir}/*.a
# This file is corrupt, don't try to package it.
rm -rf ${RPM_BUILD_ROOT}%{_datadir}/vampirtrace/doc/opari/lacsi01.ps.gz
# Clean up long names
pushd ${RPM_BUILD_ROOT}%{_bindir}
for i in otfaux otfcompress otfconfig otfdump otfmerge; do
ln -s %{_arch}-redhat-linux-gnu-$i $i;
done
popd
%clean %clean
[ ! -z "${RPM_BUILD_ROOT}" ] && rm -rf ${RPM_BUILD_ROOT} [ ! -z "${RPM_BUILD_ROOT}" ] && rm -rf ${RPM_BUILD_ROOT}
%post %post
alternatives --install %{_bindir}/mpirun mpi-run %{_bindir}/orterun \ %{_sbindir}/update-alternatives --install %{_bindir}/mpirun mpi-run %{_bindir}/orterun \
%{priority} \ %{priority} \
--slave %{_bindir}/mpiexec mpi-exec %{_bindir}/orterun \ --slave %{_bindir}/mpiexec mpi-exec %{_bindir}/orterun \
--slave %{_mandir}/man1/mpirun.1.gz mpi-run-man \ --slave %{_mandir}/man1/mpirun.1.gz mpi-run-man \
@ -194,21 +231,25 @@ alternatives --install %{_bindir}/mpirun mpi-run %{_bindir}/orterun \
%{_datadir}/%{mpidir}/man/man1/orterun.1.gz %{_datadir}/%{mpidir}/man/man1/orterun.1.gz
%preun %preun
alternatives --remove mpi-run %{_bindir}/orterun if [ $1 -eq 0 ] ; then
%{_sbindir}/update-alternatives --remove mpi-run %{_bindir}/orterun
fi
%post libs %post libs
alternatives --install %{_sysconfdir}/ld.so.conf.d/mpi%{mode}.conf \ %{_sbindir}/update-alternatives --install %{_sysconfdir}/ld.so.conf.d/mpi%{mode}.conf \
mpilibs%{mode} %{_libdir}/%{mpidir}/%{name}.ld.conf %{priority} mpilibs%{mode} %{_libdir}/%{mpidir}/%{name}.ld.conf %{priority}
/sbin/ldconfig /sbin/ldconfig
%preun libs %preun libs
alternatives --remove mpilibs%{mode} %{_libdir}/%{mpidir}/%{name}.ld.conf if [ $1 -eq 0 ] ; then
%{_sbindir}/update-alternatives --remove mpilibs%{mode} %{_libdir}/%{mpidir}/%{name}.ld.conf
fi
%postun libs -p /sbin/ldconfig %postun libs -p /sbin/ldconfig
%post devel %post devel
alternatives --install %{_bindir}/mpicc mpicc \ %{_sbindir}/update-alternatives --install %{_bindir}/mpicc mpicc \
%{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode} \ %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode} \
%{priority} \ %{priority} \
--slave %{_bindir}/mpic++ mpic++ \ --slave %{_bindir}/mpic++ mpic++ \
@ -223,7 +264,9 @@ alternatives --install %{_bindir}/mpicc mpicc \
%{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode} %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
%preun devel %preun devel
alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode} if [ $1 -eq 0 ] ; then
%{_sbindir}/update-alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
fi
%postun devel -p /sbin/ldconfig %postun devel -p /sbin/ldconfig
@ -232,9 +275,21 @@ alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
%doc LICENSE README %doc LICENSE README
%config(noreplace) %{_sysconfdir}/openmpi-* %config(noreplace) %{_sysconfdir}/openmpi-*
%dir %{_datadir}/%{mpidir} %dir %{_datadir}/%{mpidir}
%{_bindir}/ompi-clean
%{_bindir}/ompi-ps
%{_bindir}/ompi-server
%{_bindir}/opari
%{_bindir}/orte-clean
%{_bindir}/orte-iof
%{_bindir}/orte-ps
%{_bindir}/orted %{_bindir}/orted
%{_bindir}/orterun %{_bindir}/orterun
%{_bindir}/ompi_info %{_bindir}/ompi_info
%{_bindir}/*otf*
%ghost %{_bindir}/mpirun
%ghost %{_bindir}/mpiexec
%ghost %{_mandir}/man1/mpirun.1.gz
%ghost %{_mandir}/man1/mpiexec.1.gz
%{_datadir}/%{mpidir}/* %{_datadir}/%{mpidir}/*
%exclude %{_datadir}/%{mpidir}/bin%{mode} %exclude %{_datadir}/%{mpidir}/bin%{mode}
%exclude %{_datadir}/%{mpidir}/help%{mode}/openmpi/*-wrapper-data.txt %exclude %{_datadir}/%{mpidir}/help%{mode}/openmpi/*-wrapper-data.txt
@ -244,6 +299,7 @@ alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
%defattr(-,root,root,-) %defattr(-,root,root,-)
%dir %{_libdir}/%{mpidir} %dir %{_libdir}/%{mpidir}
%dir %{_libdir}/%{mpidir}/%{name} %dir %{_libdir}/%{mpidir}/%{name}
%ghost %{_sysconfdir}/ld.so.conf.d/mpi%{mode}.conf
%{_libdir}/%{mpidir}/*.so.* %{_libdir}/%{mpidir}/*.so.*
%{_libdir}/%{mpidir}/%{name}/*.so %{_libdir}/%{mpidir}/%{name}/*.so
%{_libdir}/%{mpidir}/*.conf %{_libdir}/%{mpidir}/*.conf
@ -251,13 +307,16 @@ alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
%files devel %files devel
%defattr(-,root,root,-) %defattr(-,root,root,-)
%{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode} %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
%dir %{_includedir}/%{mpidir} %ghost %{_bindir}/mpicc
%dir %{_datadir}/%{mpidir}/bin%{mode} %ghost %{_bindir}/mpic++
%dir %{_datadir}/%{mpidir}/man/man3 %ghost %{_bindir}/mpiCC
%{_datadir}/%{mpidir}/bin%{mode} %ghost %{_bindir}/mpicxx
%ghost %{_bindir}/mpif77
%ghost %{_bindir}/mpif90
%{_datadir}/%{mpidir}/bin%{mode}/
%{_datadir}/%{mpidir}/help%{mode}/openmpi/*-wrapper-data.txt %{_datadir}/%{mpidir}/help%{mode}/openmpi/*-wrapper-data.txt
%{_includedir}/%{mpidir}/* %{_includedir}/%{mpidir}/
%{_datadir}/%{mpidir}/man/man3/* %{_datadir}/%{mpidir}/man/man3/
%{_libdir}/%{mpidir}/*.so %{_libdir}/%{mpidir}/*.so
%{_libdir}/%{mpidir}/*.la %{_libdir}/%{mpidir}/*.la
%{_libdir}/%{mpidir}/%{name}/*.la %{_libdir}/%{mpidir}/%{name}/*.la
@ -265,8 +324,21 @@ alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
%{_libdir}/%{mpidir}/*.mod %{_libdir}/%{mpidir}/*.mod
%{_libdir}/%{mpidir}/*.module %{_libdir}/%{mpidir}/*.module
%files vt
%defattr(-,root,root,-)
%{_bindir}/vtcc
%{_bindir}/vtcxx
%{_bindir}/vtf77
%{_bindir}/vtf90
%{_bindir}/vtfilter
%{_bindir}/vtunify
%{_datadir}/vampirtrace/
%changelog %changelog
* Tue Apr 14 2009 Tom "spot" Callaway <tcallawa@redhat.com> - 1.3.1-1
- update to 1.3.1, cleanup alternatives, spec, make new vt subpackage
* Thu Feb 26 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.2.4-3 * Thu Feb 26 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.2.4-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild - Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
@ -302,7 +374,7 @@ alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
- Integrate fixes made in RHEL4 openmpi into RHEL5 (fix a multilib conflict - Integrate fixes made in RHEL4 openmpi into RHEL5 (fix a multilib conflict
for the openmpi.module file by moving from _datadir to _libdir, make sure for the openmpi.module file by moving from _datadir to _libdir, make sure
all sed replacements have the g flag so they replace all instances of all sed replacements have the g flag so they replace all instances of
the marker per line, not just the first, and add a %defattr tag to the the marker per line, not just the first, and add a %%defattr tag to the
files section of the -libs package to avoid install errors about files section of the -libs package to avoid install errors about
brewbuilder not being a user or group) brewbuilder not being a user or group)
- Resolves: bz229298 - Resolves: bz229298
@ -333,7 +405,7 @@ alternatives --remove mpicc %{_bindir}/opal_wrapper-%{version}-%{opt_cc}-%{mode}
- Split the 32bit and 64bit libs ld.so.conf.d files into two files so - Split the 32bit and 64bit libs ld.so.conf.d files into two files so
multilib or single lib installs both work properly multilib or single lib installs both work properly
- Put libs into their own package - Put libs into their own package
- Add symlinks to /usr/share/openmpi/bin%{mode} so that opal_wrapper-%{mode} - Add symlinks to /usr/share/openmpi/bin%%{mode} so that opal_wrapper-%%{mode}
can be called even if it isn't the currently selected default method in can be called even if it isn't the currently selected default method in
the alternatives setup (opal_wrapper needs to be called by mpicc, mpic++, the alternatives setup (opal_wrapper needs to be called by mpicc, mpic++,
etc. in order to determine compile mode from argv[0]). etc. in order to determine compile mode from argv[0]).

2
sources
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@ -1 +1 @@
311b38c597f54d8d6b277225ef458666 openmpi-1.2.4.tar.bz2 d759523b0752139872c534714d641d64 openmpi-1.3.1.tar.bz2