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%{!?python3_sitearch: %global python3_sitearch %(%{__python3} -c "from distutils.sysconfig import get_python_lib; print get_python_lib(1)")}
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Name: mvapich2
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Version: 2.3.6
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Release: 3%{?dist}
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Summary: OSU MVAPICH2 MPI package
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Group: Development/Libraries
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# Richard Fontana wrote in https://bugzilla.redhat.com/show_bug.cgi?id=1333114:
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## The mvapich2 source code is predominantly 3-clause BSD with a smattering of
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## 2-clause BSD, MIT and proto-MIT licensed source code. Under the license
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## abbreviation system inherited from Fedora that set of licenses is adequately
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## described as 'BSD and MIT'.
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## There are a couple of source files that indicate they are taken from glibc
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## with LGPL license notices, but context strongly suggests that the author of
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## that particular code placed it under the MIT license (which is consistent
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## with the approach to copyright assignment in glibc in which the author
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## receives a broad grant-back license permitting sublicensing under terms
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## other than LGPL).
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License: BSD and MIT
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URL: http://mvapich.cse.ohio-state.edu
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Source: http://mvapich.cse.ohio-state.edu/download/mvapich/mv2/%{name}-%{version}.tar.gz
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Source1: mvapich2.module.in
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Source2: mvapich2.macros.in
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# We delete bundled stuff in the prep step. The *-unbundle-* patches adjust
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# the configure scripts and Makefiles accordingly.
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Patch1: 0001-mvapich23-unbundle-contrib-hwloc.patch
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Patch2: 0002-mvapich23-unbundle-osu_benchmarks.patch
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BuildRequires: gcc-gfortran, gcc-c++
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BuildRequires: libibumad-devel, libibverbs-devel >= 1.1.3, librdmacm-devel
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BuildRequires: python3-devel, perl-Digest-MD5, hwloc-devel, rdma-core-devel
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BuildRequires: bison, flex
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BuildRequires: autoconf, automake, libtool
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BuildRequires: rpm-mpi-hooks, rdma-core-devel, infiniband-diags-devel
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%ifarch x86_64
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BuildRequires: libpsm2-devel >= 10.3.58
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%endif
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ExcludeArch: s390 s390x
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Provides: mpi
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Requires: environment-modules
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%global common_desc MVAPICH2 is a Message Passing Interface (MPI 3.0) implementation based on MPICH\
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and developed by Ohio State University.
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%description
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%{common_desc}
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%package devel
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Summary: Development files for %{name}
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Group: Development/Libraries
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Provides: mpi-devel
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Requires: librdmacm-devel, libibverbs-devel, libibumad-devel
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Requires: %{name}%{?_isa} = %{version}-%{release}
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Requires: gcc-gfortran
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%description devel
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Contains development headers and libraries for %{name}.
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%package doc
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Summary: Documentation files for mvapich2
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Group: Documentation
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BuildArch: noarch
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%description doc
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Additional documentation for mvapich2.
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%ifarch x86_64
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%package psm2
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Summary: OSU MVAPICH2 MPI package 2.3 for Omni-Path adapters
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Group: Development/Libraries
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Provides: mpi
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Requires: environment-modules
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%description psm2
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%{common_desc}
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This is a version of mvapich2 2.3 that uses the PSM2 transport for Omni-Path
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adapters.
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%package psm2-devel
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Summary: Development files for %{name}-psm2
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Group: Development/Libraries
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Provides: mpi-devel
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Requires: librdmacm-devel, libibverbs-devel, libibumad-devel
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Requires: %{name}-psm2%{?_isa} = %{version}-%{release}
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Requires: gcc-gfortran
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%description psm2-devel
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Contains development headers and libraries for %{name}-psm2.
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%endif
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%prep
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%setup -q
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%patch1 -p1
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%patch2 -p1
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# bundled hwloc, knem kernel module
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rm -r contrib/
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# limic kernel module
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rm -r limic2-0.5.6/
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# bundled OSU benchmarks
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rm -r osu_benchmarks/
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# Remove rpath, part 1
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find . -name configure -exec \
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sed -i -r 's/(hardcode_into_libs)=.*$/\1=no/' '{}' ';'
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mkdir .default
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mv * .default
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mv .default default
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%ifarch x86_64
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cp -pr default psm2
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%endif
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%build
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%set_build_flags
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export FFLAGS="$FFLAGS -fallow-argument-mismatch"
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export AR=ar
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%ifarch x86_64
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%global variant %{name}-psm2
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%global libname %{variant}
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%global namearch %{variant}-%{_arch}
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cd psm2
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./configure \
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--prefix=%{_libdir}/%{libname} \
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--exec-prefix=%{_libdir}/%{libname} \
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--bindir=%{_libdir}/%{libname}/bin \
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--sbindir=%{_libdir}/%{libname}/bin \
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--libdir=%{_libdir}/%{libname}/lib \
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--mandir=%{_mandir}/%{namearch} \
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--includedir=%{_includedir}/%{namearch} \
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--sysconfdir=%{_sysconfdir}/%{namearch} \
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--datarootdir=%{_datadir}/%{libname} \
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--docdir=%{_docdir}/%{name} \
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--enable-error-checking=runtime \
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--enable-timing=none \
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--enable-g=mem,dbg,meminit \
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--enable-fast=all \
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--enable-shared \
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--enable-static \
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--enable-fortran=all \
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--enable-cxx \
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--disable-silent-rules \
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--disable-wrapper-rpath \
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--with-hwloc=v2 \
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--with-device=ch3:psm
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# Remove rpath, part 2
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find . -name libtool -exec \
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sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g;
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s|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' '{}' ';'
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make %{?_smp_mflags}
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cd ..
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%endif
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%global variant %{name}
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%global libname %{variant}
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%global namearch %{variant}-%{_arch}
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cd default
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./configure \
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--prefix=%{_libdir}/%{libname} \
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--exec-prefix=%{_libdir}/%{libname} \
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--bindir=%{_libdir}/%{libname}/bin \
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--sbindir=%{_libdir}/%{libname}/bin \
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--libdir=%{_libdir}/%{libname}/lib \
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--mandir=%{_mandir}/%{namearch} \
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--includedir=%{_includedir}/%{namearch} \
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--sysconfdir=%{_sysconfdir}/%{namearch} \
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--datarootdir=%{_datadir}/%{libname} \
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--docdir=%{_docdir}/%{name} \
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--enable-error-checking=runtime \
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--enable-timing=none \
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--enable-g=mem,dbg,meminit \
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--enable-fast=all \
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--enable-shared \
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--enable-static \
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--enable-fortran=all \
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--enable-cxx \
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--disable-silent-rules \
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--disable-wrapper-rpath \
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--with-hwloc=v2
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# Remove rpath, part 2
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find . -name libtool -exec \
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sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g;
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s|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' '{}' ';'
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make %{?_smp_mflags}
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cd ..
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%install
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finish_install() {
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local VARIANT="$1"
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local LIBNAME="$VARIANT"
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local NAMEARCH="$VARIANT-%{_arch}"
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local MODULE_TEMPLATE="$2"
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local MACROS_TEMPLATE="$3"
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local FORTRAN_SUBDIR_SUFFIX="$4"
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find %{buildroot}%{_libdir}/$LIBNAME/lib -name \*.la -delete
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mkdir -p %{buildroot}%{_mandir}/$NAMEARCH/man{2,4,5,6,7,8,9,n}
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mkdir -p %{buildroot}/%{_fmoddir}/$LIBNAME$FORTRAN_SUBDIR_SUFFIX
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mkdir -p %{buildroot}/%{python3_sitearch}/$LIBNAME
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# Make the environment-modules file
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mkdir -p %{buildroot}%{_sysconfdir}/modulefiles/mpi
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sed "s#@LIBDIR@#%{_libdir}/$LIBNAME#g;
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s#@ETCDIR@#%{_sysconfdir}/$NAMEARCH#g;
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s#@FMODDIR@#%{_fmoddir}/$LIBNAME$FORTRAN_SUBDIR_SUFFIX#g;
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s#@INCDIR@#%{_includedir}/$NAMEARCH#g;
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s#@MANDIR@#%{_mandir}/$NAMEARCH#g;
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s#@PYSITEARCH@#%{python3_sitearch}/$LIBNAME#g;
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s#@COMPILER@#$NAMEARCH#g;
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s#@SUFFIX@#_$VARIANT#g" \
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< $MODULE_TEMPLATE \
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> %{buildroot}%{_sysconfdir}/modulefiles/mpi/$NAMEARCH
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# make the rpm config file
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mkdir -p %{buildroot}%{_sysconfdir}/rpm
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# do not expand _arch
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sed "s#@MACRONAME@#${LIBNAME//[-.]/_}#g;
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s#@MODULENAME@#$NAMEARCH#" \
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< $MACROS_TEMPLATE \
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> %{buildroot}/%{_sysconfdir}/rpm/macros.$NAMEARCH
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}
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# 'make install' fails to mkdir docdir by itself before installing index.html
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mkdir -p %{buildroot}%{_docdir}/%{name}
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%ifarch x86_64
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cd psm2
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%make_install
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finish_install %{name}-psm2 %SOURCE1 %SOURCE2 ""
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cd ..
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%endif
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cd default
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%make_install
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finish_install %{name} %SOURCE1 %SOURCE2 ""
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cd ..
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%global variant %{name}
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%global libname %{variant}
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%global namearch %{variant}-%{_arch}
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%files
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%dir %{_libdir}/%{libname}
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%dir %{_libdir}/%{libname}/bin
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%dir %{_libdir}/%{libname}/lib
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%dir %{_mandir}/%{namearch}
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%dir %{_mandir}/%{namearch}/man*
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%dir %{_fmoddir}/%{libname}
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%dir %{python3_sitearch}/%{libname}
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%{_libdir}/%{libname}/bin/hydra_nameserver
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%{_libdir}/%{libname}/bin/hydra_persist
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%{_libdir}/%{libname}/bin/hydra_pmi_proxy
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%{_libdir}/%{libname}/bin/mpichversion
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%{_libdir}/%{libname}/bin/mpiexec
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%{_libdir}/%{libname}/bin/mpiexec.hydra
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%{_libdir}/%{libname}/bin/mpiexec.mpirun_rsh
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%{_libdir}/%{libname}/bin/mpiname
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%{_libdir}/%{libname}/bin/mpirun
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%{_libdir}/%{libname}/bin/mpirun_rsh
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%{_libdir}/%{libname}/bin/mpispawn
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%{_libdir}/%{libname}/bin/mpivars
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%{_libdir}/%{libname}/bin/parkill
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%{_libdir}/%{libname}/lib/*.so.*
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%{_mandir}/%{namearch}/man1/hydra_*
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%{_mandir}/%{namearch}/man1/mpiexec.*
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%{_sysconfdir}/modulefiles/mpi/%{namearch}
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%files devel
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%dir %{_includedir}/%{namearch}
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%{_sysconfdir}/rpm/macros.%{namearch}
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%{_includedir}/%{namearch}/*
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%{_libdir}/%{libname}/bin/mpic++
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%{_libdir}/%{libname}/bin/mpicc
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%{_libdir}/%{libname}/bin/mpicxx
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%{_libdir}/%{libname}/bin/mpif77
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%{_libdir}/%{libname}/bin/mpif90
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%{_libdir}/%{libname}/bin/mpifort
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%{_libdir}/%{libname}/lib/pkgconfig
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%{_libdir}/%{libname}/lib/*.a
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%{_libdir}/%{libname}/lib/*.so
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%{_mandir}/%{namearch}/man1/mpi[cf]*
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%{_mandir}/%{namearch}/man3/*
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%files doc
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%{_docdir}/%{name}
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%ifarch x86_64
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%global variant %{name}-psm2
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%global libname %{variant}
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%global namearch %{variant}-%{_arch}
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%files psm2
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%dir %{_libdir}/%{libname}
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%dir %{_libdir}/%{libname}/bin
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%dir %{_libdir}/%{libname}/lib
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%dir %{_mandir}/%{namearch}
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%dir %{_mandir}/%{namearch}/man*
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%dir %{_fmoddir}/%{libname}
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%dir %{python3_sitearch}/%{libname}
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%{_libdir}/%{libname}/bin/hydra_nameserver
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%{_libdir}/%{libname}/bin/hydra_persist
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%{_libdir}/%{libname}/bin/hydra_pmi_proxy
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%{_libdir}/%{libname}/bin/mpichversion
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%{_libdir}/%{libname}/bin/mpiexec
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%{_libdir}/%{libname}/bin/mpiexec.hydra
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%{_libdir}/%{libname}/bin/mpiexec.mpirun_rsh
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%{_libdir}/%{libname}/bin/mpiname
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%{_libdir}/%{libname}/bin/mpirun
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%{_libdir}/%{libname}/bin/mpirun_rsh
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%{_libdir}/%{libname}/bin/mpispawn
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%{_libdir}/%{libname}/bin/mpivars
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%{_libdir}/%{libname}/bin/parkill
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%{_libdir}/%{libname}/lib/*.so.*
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%{_mandir}/%{namearch}/man1/hydra_*
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%{_mandir}/%{namearch}/man1/mpiexec.*
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%{_sysconfdir}/modulefiles/mpi/%{namearch}
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%files psm2-devel
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%dir %{_includedir}/%{namearch}
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%{_sysconfdir}/rpm/macros.%{namearch}
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%{_includedir}/%{namearch}/*
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%{_libdir}/%{libname}/bin/mpic++
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%{_libdir}/%{libname}/bin/mpicc
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%{_libdir}/%{libname}/bin/mpicxx
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%{_libdir}/%{libname}/bin/mpif77
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%{_libdir}/%{libname}/bin/mpif90
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%{_libdir}/%{libname}/bin/mpifort
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%{_libdir}/%{libname}/lib/pkgconfig
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%{_libdir}/%{libname}/lib/*.a
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%{_libdir}/%{libname}/lib/*.so
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%{_mandir}/%{namearch}/man1/mpi[cf]*
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%{_mandir}/%{namearch}/man3/*
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%endif
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%changelog
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* Mon Aug 09 2021 Mohan Boddu <mboddu@redhat.com> - 2.3.6-3
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- Rebuilt for IMA sigs, glibc 2.34, aarch64 flags
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Related: rhbz#1991688
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* Fri Aug 6 2021 Florian Weimer <fweimer@redhat.com> - 2.3.6-2
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- Rebuild to pick up new build flags from redhat-rpm-config (#1984652)
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* Sun Jun 20 2021 Honggang Li <honli@redhat.com> - 2.3.6-1
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- Update to upstream stable point release v2.3.6
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- Resolves: rhbz#1960478
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* Fri Apr 16 2021 Mohan Boddu <mboddu@redhat.com> - 2.3.5-3
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- Rebuilt for RHEL 9 BETA on Apr 15th 2021. Related: rhbz#1947937
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* Wed Feb 17 2021 Honggang Li <honli@redhat.com> - 2.3.5-2
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- build mvapich2-2.3.5-2.tar.gz for RHEL9
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- Resolves: rhbz#1923559
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CentOS Sources
Stepan Oksanichenko