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|
@ -0,0 +1,365 @@
|
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|
|
%if 0%{?fedora} <= 22
|
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|
|
%global _hardened_build 1
|
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|
|
%endif
|
|
|
|
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|
|
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|
|
%if 0%{?rhel} < 7
|
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|
|
%{!?__global_ldflags: %global __global_ldflags -Wl,-z,relro}
|
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|
|
%endif
|
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|
|
%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
|
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|
|
%global arch64 1
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|
|
%else
|
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|
|
%global arch64 0
|
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|
|
%endif
|
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|
|
Name: metis
|
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|
|
Version: 5.1.0
|
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|
|
Release: 17%{?dist}
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|
|
Summary: Serial Graph Partitioning and Fill-reducing Matrix Ordering
|
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|
|
License: ASL 2.0 and BSD and LGPLv2+
|
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Group: Development/Libraries
|
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|
URL: http://glaros.dtc.umn.edu/gkhome/views/%{name}
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|
Source0: http://glaros.dtc.umn.edu/gkhome/fetch/sw/%{name}/%{name}-%{version}.tar.gz
|
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|
|
## This patch sets up libmetis soname of libmetis
|
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|
|
Patch0: %{name}-libmetis.patch
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|
|
## This patch sets up shared GKlib library
|
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|
|
Patch1: %{name}-shared-GKlib.patch
|
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|
|
## Specify the width (32 or 64 bits) of the elementary data type
|
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|
|
## used in METIS. This is controled by the IDXTYPEWIDTH
|
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|
|
## constant.
|
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|
|
## For now, on a 32 bit architecture you can only specify a width of 32,
|
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|
|
## whereas for a 64 bit architecture you can specify a width of either
|
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|
|
## 32 or 64 bits.
|
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|
|
Patch2: %{name}-width-datatype.patch
|
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|
|
## This patch sets up GKREGEX, GKRAND, libsuffix options to the Makefiles
|
|
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|
|
Patch3: %{name}-GKREGEX-GKRAND-LIBSUFFIX-fix.patch
|
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|
|
## Rename library of 64 integer version
|
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|
|
Patch4: %{name}_lib64.patch
|
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|
|
BuildRequires: cmake
|
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|
|
BuildRequires: pcre-devel
|
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|
|
BuildRequires: help2man
|
|
|
|
|
BuildRequires: chrpath
|
|
|
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|
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|
|
%description
|
|
|
|
|
METIS is a set of serial programs for partitioning graphs,
|
|
|
|
|
partitioning finite element meshes, and producing fill reducing
|
|
|
|
|
orderings for sparse matrices.
|
|
|
|
|
The algorithms implemented in METIS are based on the multilevel
|
|
|
|
|
recursive-bisection, multilevel k-way, and multi-constraint
|
|
|
|
|
partitioning schemes developed in our lab.
|
|
|
|
|
METIS is distributed with OpenMP support.
|
|
|
|
|
|
|
|
|
|
%package devel
|
|
|
|
|
Summary: The OpenMP Metis headers and development-related files
|
|
|
|
|
Group: Development/Libraries
|
|
|
|
|
Requires: %{name}%{?_isa} = %{version}-%{release}
|
|
|
|
|
%description devel
|
|
|
|
|
Header and library files of Metis, OpenMP version.
|
|
|
|
|
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
%package -n metis64
|
|
|
|
|
Summary: Serial Graph Partitioning and Fill-reducing Matrix Ordering (64bit INTEGER)
|
|
|
|
|
Group: System Environment/Libraries
|
|
|
|
|
|
|
|
|
|
%description -n metis64
|
|
|
|
|
METIS is a set of serial programs for partitioning graphs,
|
|
|
|
|
partitioning finite element meshes, and producing fill reducing
|
|
|
|
|
orderings for sparse matrices.
|
|
|
|
|
The algorithms implemented in METIS are based on the multilevel
|
|
|
|
|
recursive-bisection, multilevel k-way, and multi-constraint
|
|
|
|
|
partitioning schemes developed in our lab.
|
|
|
|
|
METIS is distributed with OpenMP support.
|
|
|
|
|
This build has 64bit INTEGER support.
|
|
|
|
|
|
|
|
|
|
%package -n metis64-devel
|
|
|
|
|
Summary: LAPACK development libraries (64bit INTEGER)
|
|
|
|
|
Group: Development/Libraries
|
|
|
|
|
Requires: metis64%{?_isa} = %{version}-%{release}
|
|
|
|
|
|
|
|
|
|
%description -n metis64-devel
|
|
|
|
|
Header and library files of Metis,
|
|
|
|
|
OpenMP version (64bit INTEGER).
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
%prep
|
|
|
|
|
%setup -qc
|
|
|
|
|
|
|
|
|
|
pushd %{name}-%{version}
|
|
|
|
|
%patch0 -p0
|
|
|
|
|
%patch1 -p0
|
|
|
|
|
%patch3 -p0
|
|
|
|
|
|
|
|
|
|
## Remove default compiler flag
|
|
|
|
|
sed -e 's|-O3||g' -i GKlib/GKlibSystem.cmake
|
|
|
|
|
popd
|
|
|
|
|
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
cp -a %{name}-%{version} metis64
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
%build
|
|
|
|
|
pushd %{name}-%{version}/build
|
|
|
|
|
export CC=gcc
|
|
|
|
|
%cmake \
|
|
|
|
|
-DGKLIB_PATH=../GKlib \
|
|
|
|
|
-DSHARED:BOOL=TRUE \
|
|
|
|
|
-DOPENMP:BOOL=ON \
|
|
|
|
|
-DPCRE:BOOL=ON \
|
|
|
|
|
-DCMAKE_C_FLAGS:STRING="%{optflags} -Wl,-z,relro -fPIC -pie -Wl,-z,now -pthread" \
|
|
|
|
|
-DCMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING="%{__global_ldflags} -fPIC -pie -Wl,-z,now" \
|
|
|
|
|
-DCMAKE_EXE_LINKER_FLAGS_RELEASE:STRING="%{__global_ldflags} -fPIC -pie -Wl,-z,now" \
|
|
|
|
|
-DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE \
|
|
|
|
|
-DCMAKE_INSTALL_PREFIX:PATH=%{_prefix} ..
|
|
|
|
|
make %{?_smp_mflags}
|
|
|
|
|
popd
|
|
|
|
|
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
cd metis64
|
|
|
|
|
patch -p0 < %{PATCH2}
|
|
|
|
|
patch -p0 < %{PATCH4}
|
|
|
|
|
mkdir -p build64
|
|
|
|
|
pushd build64
|
|
|
|
|
export CC=gcc
|
|
|
|
|
%cmake \
|
|
|
|
|
-DGKLIB_PATH=../GKlib \
|
|
|
|
|
-DSHARED:BOOL=TRUE \
|
|
|
|
|
-DOPENMP:BOOL=ON \
|
|
|
|
|
-DPCRE:BOOL=ON \
|
|
|
|
|
-DCMAKE_C_FLAGS:STRING="%{optflags} -Wl,-z,relro -fPIC -pie -Wl,-z,now -pthread" \
|
|
|
|
|
-DCMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING="%{__global_ldflags} -fPIC -pie -Wl,-z,now" \
|
|
|
|
|
-DCMAKE_EXE_LINKER_FLAGS_RELEASE:STRING="%{__global_ldflags} -fPIC -pie -Wl,-z,now" \
|
|
|
|
|
-DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE \
|
|
|
|
|
-DCMAKE_INSTALL_PREFIX:PATH=%{_prefix} ..
|
|
|
|
|
make %{?_smp_mflags}
|
|
|
|
|
popd
|
|
|
|
|
cd ../
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
%install
|
|
|
|
|
pushd %{name}-%{version}/build
|
|
|
|
|
%make_install
|
|
|
|
|
|
|
|
|
|
## Generate manpages from binaries
|
|
|
|
|
%if 0%{?el6}
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-option="%{version}" -n "Partitions a graph into a specified number of parts." \
|
|
|
|
|
-N --output="gpmetis.1" -h -help %{buildroot}%{_bindir}/gpmetis
|
|
|
|
|
|
|
|
|
|
## Can't get manpage from ndmetis. Use 'ndmetis -h' command
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-option="%{version}" -n "Partitions a mesh into a specified number of parts." \
|
|
|
|
|
-N --output="mpmetis.1" -h -help %{buildroot}%{_bindir}/mpmetis
|
|
|
|
|
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-option="%{version}" -n "Converts a mesh into a graph that is compatible with METIS." \
|
|
|
|
|
-N --output="m2gmetis.1" -h -help %{buildroot}%{_bindir}/m2gmetis
|
|
|
|
|
|
|
|
|
|
%else
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-string="%{version}" -n "Partitions a graph into a specified number of parts." \
|
|
|
|
|
-N --output="gpmetis.1" --no-discard-stderr --help-option="-help" %{buildroot}%{_bindir}/gpmetis
|
|
|
|
|
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-string="%{version}" \
|
|
|
|
|
-n "Computes a fill-reducing ordering of the vertices of the graph using multilevel nested dissection." \
|
|
|
|
|
-N --output="ndmetis.1" --no-discard-stderr --help-option="-help" %{buildroot}%{_bindir}/ndmetis
|
|
|
|
|
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-string="%{version}" -n "Partitions a mesh into a specified number of parts." \
|
|
|
|
|
-N --output="mpmetis.1" --no-discard-stderr --help-option="-help" %{buildroot}%{_bindir}/mpmetis
|
|
|
|
|
|
|
|
|
|
LD_PRELOAD=%{buildroot}%{_libdir}/lib%{name}.so.0 \
|
|
|
|
|
help2man --version-string="%{version}" -n "Converts a mesh into a graph that is compatible with METIS." \
|
|
|
|
|
-N --output="m2gmetis.1" --no-discard-stderr -h "-help" %{buildroot}%{_bindir}/m2gmetis
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
mkdir -p %{buildroot}%{_mandir}/man1
|
|
|
|
|
mv *.1 %{buildroot}%{_mandir}/man1
|
|
|
|
|
popd
|
|
|
|
|
|
|
|
|
|
# Save metis.h with IDXTYPEWIDTH = 32
|
|
|
|
|
mv %{buildroot}%{_includedir}/metis.h %{buildroot}%{_includedir}/metis32.h
|
|
|
|
|
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
pushd metis64/build64
|
|
|
|
|
%make_install
|
|
|
|
|
# Save metis.h with IDXTYPEWIDTH = 64
|
|
|
|
|
mv %{buildroot}%{_includedir}/metis.h %{buildroot}%{_includedir}/metis64.h
|
|
|
|
|
popd
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
# Save metis.h with IDXTYPEWIDTH = 32
|
|
|
|
|
mv %{buildroot}%{_includedir}/metis32.h %{buildroot}%{_includedir}/metis.h
|
|
|
|
|
|
|
|
|
|
## Remove rpaths
|
|
|
|
|
chrpath -d %{buildroot}%{_bindir}/*
|
|
|
|
|
|
|
|
|
|
%check
|
|
|
|
|
cp -p %{buildroot}%{_bindir}/* %{name}-%{version}/graphs
|
|
|
|
|
pushd %{name}-%{version}/graphs
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./ndmetis mdual.graph
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./mpmetis metis.mesh 2
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./gpmetis test.mgraph 4
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./gpmetis copter2.graph 4
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./graphchk 4elt.graph
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./ndmetis64 mdual.graph
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./mpmetis64 metis.mesh 2
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./gpmetis64 test.mgraph 4
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./gpmetis64 copter2.graph 4
|
|
|
|
|
LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH ./graphchk64 4elt.graph
|
|
|
|
|
%endif
|
|
|
|
|
popd
|
|
|
|
|
|
|
|
|
|
%ldconfig_scriptlets
|
|
|
|
|
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
%ldconfig_scriptlets -n metis64
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
%files
|
|
|
|
|
%{!?_licensedir:%global license %doc}
|
|
|
|
|
%doc %{name}-%{version}/Changelog %{name}-%{version}/manual/manual.pdf
|
|
|
|
|
%license %{name}-%{version}/LICENSE.txt
|
|
|
|
|
%{_bindir}/cmpfillin
|
|
|
|
|
%{_bindir}/gpmetis
|
|
|
|
|
%{_bindir}/graphchk
|
|
|
|
|
%{_bindir}/m2gmetis
|
|
|
|
|
%{_bindir}/mpmetis
|
|
|
|
|
%{_bindir}/ndmetis
|
|
|
|
|
%{_mandir}/man1/*.1.gz
|
|
|
|
|
%{_libdir}/lib%{name}.so.*
|
|
|
|
|
|
|
|
|
|
%files devel
|
|
|
|
|
%{_includedir}/%{name}.h
|
|
|
|
|
%{_libdir}/lib%{name}.so
|
|
|
|
|
|
|
|
|
|
%if 0%{?arch64}
|
|
|
|
|
%files -n metis64
|
|
|
|
|
%{!?_licensedir:%global license %doc}
|
|
|
|
|
%doc metis64/Changelog metis64/manual/manual.pdf
|
|
|
|
|
%license metis64/LICENSE.txt
|
|
|
|
|
%{_bindir}/cmpfillin64
|
|
|
|
|
%{_bindir}/gpmetis64
|
|
|
|
|
%{_bindir}/graphchk64
|
|
|
|
|
%{_bindir}/m2gmetis64
|
|
|
|
|
%{_bindir}/mpmetis64
|
|
|
|
|
%{_bindir}/ndmetis64
|
|
|
|
|
%{_libdir}/lib%{name}64.so.*
|
|
|
|
|
|
|
|
|
|
%files -n metis64-devel
|
|
|
|
|
%{_includedir}/%{name}64.h
|
|
|
|
|
%{_libdir}/lib%{name}64.so
|
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
%changelog
|
|
|
|
|
* Sat Feb 17 2018 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-17
|
|
|
|
|
- Use %%ldconfig_scriptlets
|
|
|
|
|
|
|
|
|
|
* Thu Feb 08 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.0-16
|
|
|
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
|
|
|
|
|
|
|
|
|
|
* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.0-15
|
|
|
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
|
|
|
|
|
|
|
|
|
|
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.0-14
|
|
|
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
|
|
|
|
|
|
|
|
|
|
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.0-13
|
|
|
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
|
|
|
|
|
|
|
|
|
|
* Mon Feb 15 2016 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-12
|
|
|
|
|
- Build 64 integer version
|
|
|
|
|
|
|
|
|
|
* Thu Feb 04 2016 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.0-11
|
|
|
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
|
|
|
|
|
|
|
|
|
|
* Wed Jan 20 2016 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-10
|
|
|
|
|
- Removed ExcludeArch
|
|
|
|
|
|
|
|
|
|
* Wed Jan 20 2016 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-9
|
|
|
|
|
- Defined OpenMP support
|
|
|
|
|
- Some cleanups of the SPEC file
|
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* Wed Dec 23 2015 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-8
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- Used always 'cmake' command
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* Thu Oct 29 2015 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-7
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- Rebuild for cmake 3.4.0
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- Hardened builds on <F23
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* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 5.1.0-6
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
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* Thu Jan 15 2015 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-5
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- Built on EPEL7
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- Used new macro %%license
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* Sun Aug 17 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 5.1.0-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
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* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 5.1.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
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* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 5.1.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
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* Sun Apr 14 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.1.0-1
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- Update to 5.1.0
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* Sun Mar 31 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-10
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- Removed BR 'perl-Carp' (Bug 926996)
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- Added LD_PRELOAD before help2man tasks to fix manpage shared_lib_error
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* Sun Mar 24 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-9
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- Added BR 'perl-Carp' for Fedora
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- Excluded manpage creation for 'cmpfillin' and 'graphchk' commands
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* Wed Mar 20 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-8
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- Added BR cmake28 for EPEL6 building
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- Set up of manpages creation in EPEL6
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* Wed Mar 20 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-7
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- Removed explicit manpages compression
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- License tag changed to 'ASL 2.0 and BSD and LGPLv2+'
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* Wed Mar 20 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-6
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- Modified %%check section to perform tests properly
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* Tue Mar 19 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-5
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- Added %%check section
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- Removed GK*.h libraries installation
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* Sun Mar 17 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-4
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- Added patch to sets up GKREGEX, GKRAND, libsuffix options to the Makefiles
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- Configured patch2 condition
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- soname version of libmetis changed to 0
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- Added cmake options and flags to check openmp
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- GKlib_includes destination changed to include/metis
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- Added commands to generate binaries man-page
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- Added BR openmpi-devel, pcre-devel, help2man
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* Fri Mar 15 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-3
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- Static sub-package removed
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- TEMPORARY fix for files in "/usr/lib" removed
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- Added patches for set up shared GKlib and soname libmetis
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- Removed BR chrpath
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* Thu Mar 14 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-2
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- Initial release changed from 0 to 1
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- Removed chrpath command
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- Added metis-width-datatype.patch only for 64bit systems
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- Build commands completely changed to use %%cmake
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- TEMPORARY fix for files in "/usr/lib"
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* Sat Mar 02 2013 Antonio Trande <sagitter@fedoraproject.org> - 5.0.3-1
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- Initial package
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- Removed chrpaths
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- Added BR chrpath
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- Removed exec permissions to silence spurious-executable-perm warning
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James Antill