import atlas-3.10.3-7.el8

.atlas.metadata

@@ -0,0 +1,8 @@
+0e11ec19a521973eaa551954debd112c21479e9c SOURCES/ARMa732.tar.bz2
+9398518fe55b4a544278237bc639656e04543c50 SOURCES/ARMv732NEON.tar.bz2
+d2f7a62aacdc5091aaa673a311a23f521e5c6486 SOURCES/IBMz1264.tar.bz2
+b3ee9bca1510b11c6aa671ba5ba7dff8918ce0cf SOURCES/IBMz932.tar.bz2
+43f8d8eaf8cc62bc4665df3550b77e95f3dced22 SOURCES/IBMz964.tar.bz2
+c47ac6f00d7bf4ab882e71fa1ab894cc551c77b7 SOURCES/POWER332.tar.bz2
+85c00d3190abbe250d46472824b17d9164e3dfc2 SOURCES/PPRO32.tgz
+337eef1167030a9440ea645ce0037abfd4b0be4e SOURCES/atlas3.10.3.tar.bz2

.gitignore

@@ -0,0 +1,8 @@
+SOURCES/ARMa732.tar.bz2
+SOURCES/ARMv732NEON.tar.bz2
+SOURCES/IBMz1264.tar.bz2
+SOURCES/IBMz932.tar.bz2
+SOURCES/IBMz964.tar.bz2
+SOURCES/POWER332.tar.bz2
+SOURCES/PPRO32.tgz
+SOURCES/atlas3.10.3.tar.bz2

SOURCES/README.dist

@@ -0,0 +1,47 @@
+Notes on the packaged version of ATLAS
+
+by Quentin Spencer
+updated: October 4, 2005
+
+updated by Deji Akingunola
+October 15, 2008
+
+updated by Deji Akingunola
+June 15, 2011
+
+updated by Frantisek Kluknavsky
+Nov 20, 2012
+
+Because ATLAS relies on compile-time optimizations to obtain improved
+performance over BLAS and LAPACK, the resulting binaries are closely
+tied to the hardware on which they are compiled, and can likely result
+in very poor performance on other hardware.  For this reason,
+including a package like ATLAS in Fedora requires some compromises.
+Optimizing ATLAS for the most modern hardware can result in
+significant performance penalties for users using the same package on
+older hardware. A binary ATLAS package must perform reasonably well on the
+entire range of hardware on which it could potentially be installed.
+
+The result is a set of libraries that will not
+necessarily achieve optimal performance on any given hardware but
+should still offer significant performance gains over the reference
+BLAS and LAPACK libraries on most hardware.  
+
+In addition to the base 32bit build, subpackages are built for SSE, SSE2,
+and SSE3 ix86 extensions.
+
+On 64bit x86 systems the default atlas package was built with SSE3
+optimization.
+  
+This packaging allows multiple installation of different atlas sub-packages
+at the same time. The alternatives system (read 'man alternatives' for usage)
+is used in the -devel subpackages to select the appropriate location for the 
+architectural dependent header files.
+ 
+For users who want optimal performance on
+particular hardware, custom RPMs can be built from the source package
+by setting the RPM macro "enable_native_atlas" to a value of 1. This
+can be done from the command line as in the following example:
+
+rpmbuild -D "enable_native_atlas 1" --rebuild atlas-3.8.3-1.src.rpm
+

SOURCES/atlas-genparse.patch

@@ -0,0 +1,14 @@
+diff --git a/include/atlas_genparse.h b/include/atlas_genparse.h
+index 909a38e..1e6d153 100644
+--- a/include/atlas_genparse.h
++++ b/include/atlas_genparse.h
+@@ -163,7 +163,8 @@ static int GetDoubleArr(char *str, int N, double *d)
+       if (!str)
+          break;
+       str++;
+-      assert(sscanf(str, "%le", d+i) == 1);
++      if (sscanf(str, "%le", d+i) != 1)
++	break;
+       i++;
+    }
+    return(i);

SOURCES/atlas-getri.patch

@@ -0,0 +1,12 @@
+diff --git a/src/testing/ATL_f77getri.c b/src/testing/ATL_f77getri.c
+index 2cc576c..7ff8eba 100644
+--- a/src/testing/ATL_f77getri.c
++++ b/src/testing/ATL_f77getri.c
+@@ -97,7 +97,6 @@ int f77getri(const enum ATLAS_ORDER Order, const int N, TYPE *A, const int lda,
+    #ifdef ATL_FunkyInts
+       *lwork = F77lwork;
+       for (i=0; i < MN; i++) ipiv[i] = F77ipiv[i] + 1;
+-      free(F77ipiv);
+    #else
+       for (i=0; i < MN; i++) ipiv[i]++;
+    #endif

SOURCES/atlas-melf.patch

@@ -0,0 +1,16 @@
+diff --git a/CONFIG/src/SpewMakeInc.c b/CONFIG/src/SpewMakeInc.c
+index eed259e..65d68a1 100644
+--- a/CONFIG/src/SpewMakeInc.c
++++ b/CONFIG/src/SpewMakeInc.c
+@@ -764,9 +764,9 @@ int main(int nargs, char **args)
+       else
+       {
+          if (ptrbits == 32)
+-            fprintf(fpout, " -melf_i386");
++            fprintf(fpout, " -Wl,-melf_i386");
+          else if (ptrbits == 64)
+-            fprintf(fpout, " -melf_x86_64");
++            fprintf(fpout, " -Wl,-melf_x86_64");
+          if (OS == OSFreeBSD)
+             fprintf(fpout, "_fbsd");
+       }

SOURCES/atlas-shared_libraries.patch

@@ -0,0 +1,40 @@
+From 3119c671c566761a79ac98405cb619892acde3e8 Mon Sep 17 00:00:00 2001
+From: Lukas Slebodnik <lslebodn@redhat.com>
+Date: Fri, 20 Sep 2013 09:26:58 +0200
+Subject: [PATCH] atlas-shared_libraries
+
+---
+ ATLAS/makes/Make.lib | 9 +++++++--
+ 1 file changed, 7 insertions(+), 2 deletions(-)
+
+diff --git a/ATLAS/makes/Make.lib b/ATLAS/makes/Make.lib
+index ab1eb9963d36678972a0a410905169aaa563dc64..27c6e316b442e09b0f46afac7940aaa11e25e45c 100644
+--- a/ATLAS/makes/Make.lib
++++ b/ATLAS/makes/Make.lib
+@@ -4,6 +4,8 @@ mySRCdir = $(SRCdir)/lib
+ #
+ # override with libatlas.so only when atlas is built to one lib
+ #
++so_ver_major=3
++so_ver = $(so_ver_major).10
+ DYNlibs = liblapack.so libf77blas.so libcblas.so libatlas.so 
+ PTDYNlibs = liblapack.so libptf77blas.so libptcblas.so libatlas.so 
+ CDYNlibs = liblapack.so libcblas.so libatlas.so 
+@@ -116,9 +116,12 @@ LDTRY:
+            -rpath-link $(LIBINSTdir)  \
+            --whole-archive $(libas) --no-whole-archive $(LIBS)
+ GCCTRY:
+-	$(GOODGCC) -shared -o $(outso)  \
+-           -Wl,"-rpath-link $(LIBINSTdir)" \
++	$(GOODGCC) -shared -o $(outso).$(so_ver)  \
++           \
++           -Wl,-soname,"$(outso).$(so_ver_major)" \
+            -Wl,--whole-archive $(libas) -Wl,--no-whole-archive $(LIBS)
++	  ln -s $(outso).$(so_ver) $(outso).$(so_ver_major)
++	  ln -s $(outso).$(so_ver) $(outso)
+ GCCTRY_norp:
+ 	$(GOODGCC) -shared -o $(outso)  \
+            -Wl,--whole-archive $(libas) -Wl,--no-whole-archive $(LIBS)
+-- 
+1.8.3.1
+

SOURCES/atlas-throttling.patch

@@ -0,0 +1,12 @@
+diff -up ATLAS/CONFIG/src/config.c.zaloha ATLAS/CONFIG/src/config.c
+--- ATLAS/CONFIG/src/config.c.zaloha	2012-10-25 11:29:02.495425989 +0200
++++ ATLAS/CONFIG/src/config.c	2012-10-25 11:42:10.218216957 +0200
+@@ -711,6 +711,8 @@ int ProbePtrbits(int verb, char *targarg
+ 
+ int ProbeCPUThrottle(int verb, char *targarg, enum OSTYPE OS, enum ASMDIA asmb)
+ {
++   return 0; /* impossible to turn off cpu throttling => ignore */
++             /* this undermines performance of compiled library */
+    int i, iret;
+    char *ln;
+    i = strlen(targarg) + 22 + 12;

SOURCES/atlas.3.10.1-unbundle.patch

@@ -0,0 +1,17 @@
+diff -up wrk/makes/Make.lib.wrk wrk/makes/Make.lib
+--- wrk/makes/Make.lib.wrk	2015-01-23 21:14:46.465494411 +0100
++++ wrk/makes/Make.lib	2015-01-23 22:48:39.632479588 +0100
+@@ -185,11 +185,11 @@ TRYALL :
+ #
+ fat_ptshared :                              # threaded target
+ 	$(MAKE) TRYALL outso=libtatlas.so \
+-                libas="libptlapack.a libptf77blas.a libptcblas.a libatlas.a" \
++                libas="libptlapack.a libptf77blas.a libptcblas.a libatlas.a $(SLAPACKlib)" \
+                 LIBINSTdir="$(LIBINSTdir)"
+ fat_shared :                                # serial target
+ 	$(MAKE) TRYALL outso=libsatlas.so \
+-                libas="liblapack.a libf77blas.a libcblas.a libatlas.a" \
++                libas="liblapack.a libf77blas.a libcblas.a libatlas.a $(SLAPACKlib)" \
+                 LIBINSTdir="$(LIBINSTdir)"
+ #
+ # Builds shared lib, not include fortran codes from LAPACK