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SuperLU package is retired on c9s for CS-704

This commit is contained in:
Troy Dawson 2022-04-14 13:16:42 -07:00
parent 4d727ccd1e
commit 0e9c6e15f1
8 changed files with 1 additions and 3078 deletions
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6
.gitignore vendored
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/superlu_4.3.tar.gz
/superlu_5.1.1.tar.gz
/superlu_5.2.0.tar.gz
/superlu_5.2.1.tar.gz
/superlu-5.2.1.tar.gz
/superlu-5.2.2.tar.gz

11
SuperLU-5.2.2-set_soname.patch
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--- a/SRC/CMakeLists.orig.txt 2018-04-25 15:17:39.786715000 +0200
+++ b/SRC/CMakeLists.txt 2018-04-25 15:25:00.253317607 +0200
@@ -242,7 +242,7 @@
$<INSTALL_INTERFACE:include>
)
set_target_properties(superlu PROPERTIES
- VERSION ${PROJECT_VERSION} SOVERSION ${VERSION_MAJOR}
+ VERSION ${PROJECT_VERSION} SOVERSION ${VERSION_MAJOR}.${VERSION_MINOR}
)
# Define GNU standard installation directories

48
SuperLU-fedora-make.inc.in
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@ -1,48 +0,0 @@
############################################################################
#
# Program: SuperLU
#
# Module: make.inc
#
# Purpose: Top-level Definitions
#
# Creation date: May 10, 2015
#
# Modified:
#
#
############################################################################
#
# The name of the libraries to be created/linked to
#
SuperLUroot = ${CMAKE_SOURCE_DIR}/build
#
# SuperLUroot = ${CMAKE_INSTALL_PREFIX}
SUPERLULIB = $(SuperLUroot)/SRC/${PROJECT_NAME_LIB_EXPORT}
#TMGLIB = libtmglib.a
# BLASDEF = -DUSE_VENDOR_BLAS
BLASLIB = $(TPL_BLAS_LIBRARIES)
LIBS = $(SUPERLULIB) $(BLASLIB)
#
# The archiver and the flag(s) to use when building archive (library)
# If your system has no ranlib, set RANLIB = echo.
#
ARCH = @CMAKE_AR@
ARCHFLAGS = cr
RANLIB = @CMAKE_RANLIB@
CC = @CMAKE_C_COMPILER@
CFLAGS = @CMAKE_C_FLAGS_RELEASE@ @CMAKE_C_FLAGS@
NOOPTS =
FORTRAN = @CMAKE_Fortran_COMPILER@
LOADER = $(CC)
LOADOPTS = $(LDFLAGS)
#
# The directory in which Matlab is installed
#
MATLAB = /Applications/MATLAB_R2015b.app

54
SuperLU-fix_example_builds.patch
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@ -1,54 +0,0 @@
--- a/EXAMPLE/Makefile.orig 2020-10-18 00:23:21.000000000 +0200
+++ b/EXAMPLE/Makefile 2021-01-29 17:58:26.396762602 +0100
@@ -101,10 +101,10 @@
$(LOADER) $(LOADOPTS) $(SLINXEXM3) $(LIBS) -lm -o $@
sitersol: $(SITSOL) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
sitersol1: $(SITSOL1) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
dlinsol: $(DLINEXM) $(SUPERLULIB)
$(LOADER) $(LOADOPTS) $(DLINEXM) $(LIBS) -lm -o $@
@@ -128,10 +128,10 @@
$(LOADER) $(LOADOPTS) $(SUPERLUEXM) $(LIBS) -lm -o $@
ditersol: $(DITSOL) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
ditersol1: $(DITSOL1) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
clinsol: $(CLINEXM) $(SUPERLULIB)
$(LOADER) $(LOADOPTS) $(CLINEXM) $(LIBS) -lm -o $@
@@ -152,10 +152,10 @@
$(LOADER) $(LOADOPTS) $(CLINXEXM3) $(LIBS) -lm -o $@
citersol: $(CITSOL) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
citersol1: $(CITSOL1) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
zlinsol: $(ZLINEXM) $(SUPERLULIB)
$(LOADER) $(LOADOPTS) $(ZLINEXM) $(LIBS) -lm -o $@
@@ -176,10 +176,10 @@
$(LOADER) $(LOADOPTS) $(ZLINXEXM3) $(LIBS) -lm -o $@
zitersol: $(ZITSOL) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
zitersol1: $(ZITSOL1) $(SUPERLULIB)
- $(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) -lm -o $@
+ $(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) $(TPL_BLAS_LIBRARIES) -lm -o $@
.c.o:
$(CC) $(CFLAGS) $(CDEFS) $(INCLUDEDIR) -c $< $(VERBOSE)

296
SuperLU.spec
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%global genname superlu
%global libver 5
Name: SuperLU
Version: 5.2.2
Release: 2%{?dist}
Summary: Subroutines to solve sparse linear systems
License: BSD and GPLv2+
URL: https://portal.nersc.gov/project/sparse/superlu/
Source0: https://github.com/xiaoyeli/superlu/archive/v%{version}/%{genname}-%{version}.tar.gz
# Use a pre-made configuration file for Make
Source1: %{name}-fedora-make.inc.in
Patch0: %{genname}-removemc64.patch
# Patch soname (5 -> 5.2) of shared library
Patch1: %{name}-%{version}-set_soname.patch
# Fix ldflags of example files
Patch2: %{name}-fix_example_builds.patch
%if 0%{?fedora} >= 33
BuildRequires: pkgconfig(flexiblas)
%else
%ifarch %{openblas_arches}
BuildRequires: openblas-devel, openblas-srpm-macros
%else
BuildRequires: blas-devel
%endif
BuildRequires: atlas-devel
%if 0%{?epel}
BuildRequires: epel-rpm-macros
%endif
%endif
BuildRequires: make
BuildRequires: cmake3
BuildRequires: gcc, gcc-gfortran
BuildRequires: csh
%description
SuperLU contains a set of subroutines to solve a sparse linear system
A*X=B. It uses Gaussian elimination with partial pivoting (GEPP).
The columns of A may be preordered before factorization; the
preordering for sparsity is completely separate from the factorization.
%package devel
Summary: Header files and libraries for SuperLU development
Requires: %{name}%{?_isa} = %{version}-%{release}
%description devel
The %{name}-devel package contains the header files
and libraries for use with %{name} package.
%package doc
Summary: Documentation and Examples for SuperLU
BuildArch: noarch
%description doc
The %{name}-doc package contains all the help HTML documentation.
%prep
%autosetup -n %{genname}-%{version} -p1
rm -f make.inc
cp -pf %{SOURCE1} make.inc.in
# Remove bundled BLAS
rm -rf CBLAS
rm -fr SRC/mc64ad.f.bak
find . -type f | sed -e "/TESTING/d" | xargs chmod a-x
# Remove the shippped executables from EXAMPLE
find EXAMPLE -type f | while read file
do
[ "$(file $file | awk '{print $2}')" = ELF ] && rm $file || :
done
# Change optimization level
sed -e 's|-O0|-O2|g' -i SRC/CMakeLists.txt
%build
mkdir -p build
%cmake3 -S . -B build \
-Denable_internal_blaslib:BOOL=NO \
%if 0%{?fedora} >= 33
-DTPL_BLAS_LIBRARIES="`pkg-config --libs flexiblas`" \
%else
-DTPL_BLAS_LIBRARIES=-lopenblas \
%endif
-DCMAKE_BUILD_TYPE:STRING=Release \
-DCMAKE_INSTALL_INCLUDEDIR:PATH=include/%{name} \
-DCMAKE_INSTALL_LIBDIR:PATH=%{_lib} \
-DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES
%make_build -C build
# Compile Fortran example interface to use the C routines in SuperLU
%if 0%{?fedora} >= 33
export TPL_BLAS_LIBRARIES="`pkg-config --libs flexiblas`" \
%else
export TPL_BLAS_LIBRARIES=-lopenblas \
%endif
export LDFLAGS="%{build_ldflags}"
export FFLAGS="%{build_fflags}"
export CFLAGS="%{build_cflags}"
make -C FORTRAN
make -C EXAMPLE
%install
%make_install -C build
%check
pushd build
ctest3 -V %{?_smp_mflags}
popd
# Test Fortran example interface to use the C routines in SuperLU
pushd FORTRAN
export LD_LIBRARY_PATH=%{buildroot}%{_libdir}
./df77exm < ../EXAMPLE/g20.rua
./zf77exm < ../EXAMPLE/cg20.cua
./test_omp < ../EXAMPLE/g20.rua
make clean
popd
# Test sample programs
pushd EXAMPLE
export LD_LIBRARY_PATH=%{buildroot}%{_libdir}
./superlu
make clean
popd
%files
%license License.txt
%{_libdir}/libsuperlu.so.%{libver}*
%files devel
%{_includedir}/%{name}/
%{_libdir}/libsuperlu.so
%{_libdir}/cmake/%{genname}/
%{_libdir}/pkgconfig/%{genname}.pc
%files doc
%license License.txt
%doc DOC
%changelog
* Thu Apr 15 2021 Mohan Boddu <mboddu@redhat.com> - 5.2.2-2
- Rebuilt for RHEL 9 BETA on Apr 15th 2021. Related: rhbz#1947937
* Thu Jan 28 2021 Antonio Trande <sagitter@fedoraproject.org> - 5.2.2-1
- Release 5.2.2
* Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-15
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-14
- Second attempt - Rebuilt for
https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-13
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Sat Jul 25 2020 Iñaki Úcar <iucar@fedoraproject.org> - 5.2.1-12
- https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager
* Tue Jul 21 2020 Merlin Mathesius <mmathesi@redhat.com> - 5.2.1-11
- Minor conditional fix for ELN
- Stick to cmake in-source building
* Sun Apr 19 2020 Antonio Trande <sagitter@fedoraproject.org> - 5.2.1-10
- Doc sub-package provides its own license file
* Sat Apr 18 2020 Antonio Trande <sagitter@fedoraproject.org> - 5.2.1-9
- Some minor fixes
- Compile/execute Fortran tests and examples
- Do not pack example's source code
* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Fri Sep 14 2018 Antonio Trande <sagitter@fedoraproject.org> - 5.2.1-5
- Remove gcc-gfortran as required package
* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.1-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Apr 25 2018 Antonio Trande <sagitter@fedoraproject.org> - 5.2.1-3
- Patch soname (5 -> 5.2) of shared library
* Sun Apr 15 2018 Antonio Trande <sagitter@fedoraproject.org> - 5.2.1-2
- Use cmake3 on rhel
- Use blas from system
* Fri Apr 13 2018 Rafael dos Santos <rdossant@redhat.com> - 5.2.1-1
- Update to 5.2.1
- Use cmake build system
- Drop obsolete patches
- Resolves #1547494 - build with standard Fedora flags
* Wed Feb 21 2018 Antonio Trande <sagitter@fedoraproject.org> - 5.2.0-8
- Add gcc BR
- Remove el5 bits
* Thu Feb 15 2018 Antonio Trande <sagitter@fedoraproject.org> - 5.2.0-7
- Use %%ldconfig_scriptlets
* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.0-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Sat Oct 21 2017 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 5.2.0-5
- Fix lib linking in EPEL (added conditionals; Thanks Antonio Trande))
- Use license macro
* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.2.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Thu Apr 14 2016 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 5.2.0-1
- Update to 5.2.0
- spec file cleanup
* Mon Mar 28 2016 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 5.1.1-2
- Added -doc subpackage
- Added GPLv2 in the license field
* Mon Mar 21 2016 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 5.1.1-1
- Update to 5.1.1
- Remove format security patch - not needed anymore
- Edit patches to be version specific
- Renamed patch4 to be consistent with others
- Minor spec file housekeeping
* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 4.3-14
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.3-13
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Sun Jan 25 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 4.3-12
- Fix spec file errors and remove backup files
- fixes 1084707
* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.3-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Sun Jul 13 2014 Mukundan Ragavan <nonamedotc@gmail.com> - 4.3-10
- Removed non-free files, fixes bz#1114264
* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.3-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Mon Jan 06 2014 Björn Esser <bjoern.esser@gmail.com> - 4.3-8
- fixed FTBFS if "-Werror=format-security" flag is used (#1037343)
- devel-pkg must Requires: %%{name}%%{?_isa}
- apply proper LDFLAGS
- added needed bits for el5
- reenable testsuite using Patch3
* Fri Oct 4 2013 Orion Poplawski <orion@cora.nwra.com> - 4.3-7
- Rebuild for atlas 3.10
- Handle UnversionedDocDirs change
* Fri Aug 02 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.3-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Mon Mar 25 2013 Shakthi Kannan <shakthimaan [AT] fedoraproject dot org> 4.3-5
- Ship SuperLU examples
* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.3-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Sat Aug 25 2012 Shakthi Kannan <shakthimaan [AT] fedoraproject dot org> 4.3-3
- Use README in main package and DOC in devel package
- chmod a-x on SRC/qselect.c
- Remove -latlas linking in prep section
- Added Patch comments
- Use name RPM macro in patch name
* Wed Feb 01 2012 Shakthi Kannan <shakthimaan [AT] fedoraproject dot org> 4.3-2
- Use atlas library instead of blas.
- Use RPM_OPT_FLAGS and LIBS when building sources.
- Use macros as required for name and version.
* Fri Jan 06 2012 Shakthi Kannan <shakthimaan [AT] fedoraproject dot org> 4.3-1
- First release.

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dead.package Normal file
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SuperLU package is retired on c9s for CS-704

1
sources
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SHA512 (superlu-5.2.2.tar.gz) = 091928a3df3433b337ebdacdb28de341d6d29d655965de6ffd656a6de18cf11171555bfd3af73082af62b1cead6835b4c11e4ba524a32db7f7d28db47c9d490c

2662
superlu-removemc64.patch
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